RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA340009" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA340009 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6769607 6769607 PRJNA340009_P_NODE_24646_length_247_cov_2.161616_g24339_i0 PRJNA340009 24646 247 2.161616 5.33919152 Parvoviridae sp. 1940570 Viruses Viruses 134 1.06e-35   NR XNT21000.1 1940570 g24339 i0 74.4 3.98380566801619 82 20 99.6 1 2 247 229 309 XNT21000.1 MAG: replication protein [Parvoviridae sp.] diamond 984 134 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
9998110 9998110 PRJNA340009_P_NODE_23448_length_252_cov_2.093596_g23141_i0 PRJNA340009 23448 252 2.093596 5.27586192 Betapolyomavirus macacae 1891767 Viruses Viruses 65.9 2.9e-10   NR AAK29054.1 1891767 g23141 i0 72.7 0.523809523809524 44 12 52.4 0 188 57 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 65.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
28401162 28401162 PRJNA340009_P_NODE_63946_length_166_cov_1.470085_g63639_i0 PRJNA340009 63946 166 1.470085 2.4403411 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 95.9 1.14e-21   NR QTE03982.1 2794515 g63639 i0 94.4 0.975903614457831 54 3 97.6 0 3 164 141 194 QTE03982.1 MAG: replication protein [Luscinia sibilans parvo-like hybrid virus] diamond 162 95.9 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
31844618 31844618 PRJNA340009_P_NODE_33457_length_217_cov_1.285714_g33150_i0 PRJNA340009 33457 217 1.285714 2.78999938 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 117 1.47e-29   NR QTE03982.1 2794515 g33150 i0 88.3 0.829493087557604 60 7 82.9 0 212 33 335 394 QTE03982.1 MAG: replication protein [Luscinia sibilans parvo-like hybrid virus] diamond 180 117 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;