RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA340009" and tax_phylum = "Candidatus Komeiliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Komeiliibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30643258 30643258 PRJNA340009_P_NODE_34373_length_214_cov_5.527273_g34066_i0 PRJNA340009 34373 214 5.527273 11.82836422 Candidatus Komeilibacteria bacterium RIFCSPHIGHO2_ 2053566 Bacteria Bacteria 61.2 7.85e-9   NR OGY89705.1 1798549 g34066 i0 90.3 0.434579439252336 31 3 43.5 0 122 214 1 31 OGY89705.1 MAG: phosphoribosylformylglycinamidine synthase [Candidatus Komeilibacteria bacterium RIFCSPHIGHO2_01_FULL_52_14] diamond 93 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium RIFCSPHIGHO2_01_FULL_52_14
32288071 32288071 PRJNA340009_P_NODE_67799_length_165_cov_0.879310_g67492_i0 PRJNA340009 67799 165 0.87931 1.4508615 Candidatus Komeilibacteria bacterium RIFCSPLOWO2_ 2053566 Bacteria Bacteria 43.9 0.0022   NR OGY92617.1 1798552 g67492 i0 41.8 1 55 30 100 1 165 1 10 62 OGY92617.1 MAG: hypothetical protein A3B31_02355 [Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11] diamond 165 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11
32477755 32477755 PRJNA340009_P_NODE_61939_length_167_cov_0.864407_g61632_i0 PRJNA340009 61939 167 0.864407 1.44355969 Candidatus Komeilibacteria bacterium RIFCSPLOWO2_ 2053566 Bacteria Bacteria 45.1 0.00203   NR OGY92707.1 1798552 g61632 i0 41.8 0.988023952095808 55 31 98.8 1 167 3 260 313 OGY92707.1 MAG: hypothetical protein A3B31_01615 [Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11] diamond 165 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11
32621016 32621016 PRJNA340009_P_NODE_32720_length_219_cov_1.800000_g32413_i0 PRJNA340009 32720 219 1.8 3.942 Bacteria 2 Bacteria Bacteria 69.7 9.26e-13   NR OGY89900.1 1798549 g32413 i0 66 1.23287671232877 47 16 64.4 0 78 218 3 49 OGY89900.1 MAG: hypothetical protein A2677_03610 [Candidatus Komeilibacteria bacterium RIFCSPHIGHO2_01_FULL_52_14] diamond 270 70.1 0.994293865905849 Bacteria Bacteria candidate phyla   Candidatus Komeiliibacteriota         Candidatus Komeilibacteria bacterium RIFCSPHIGHO2_01_FULL_52_14

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;