RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA340009" and tax_phylum = "Candidatus Harrisoniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Harrisoniibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17647714 17647714 PRJNA340009_P_NODE_56234_length_174_cov_2.112000_g55927_i0 PRJNA340009 56234 174 2.112 3.67488 Candidatus Harrisonbacteria bacterium 2528272 Bacteria Bacteria 107 7.99e-26   NR MBI3046034.1 2528272 g55927 i0 94.4 2.79310344827586 54 3 93.1 0 163 2 368 421 MBI3046034.1 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase [Candidatus Harrisonbacteria bacterium] diamond 486 107 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium
27408247 27408247 PRJNA340009_P_NODE_77883_length_160_cov_2.324324_g77576_i0 PRJNA340009 77883 160 2.324324 3.7189184 Bacteria 2 Bacteria Bacteria 89.4 5.670000000000001e-21   NR OGY68208.1 1798410 g77576 i0 94.2 1.95 52 3 97.5 0 3 158 26 77 OGY68208.1 MAG: transcription elongation factor GreA [Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_45_10c] diamond 312 90.1 0.992230854605993 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium RIFCSPLOWO2_02_FULL_45_10c
29442875 29442875 PRJNA340009_P_NODE_68670_length_164_cov_1.173913_g68363_i0 PRJNA340009 68670 164 1.173913 1.92521732 Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_ 2528272 Bacteria Bacteria 99.8 6.749999999999999e-23   NR OGY64120.1 1798404 g68363 i0 90.6 0.969512195121951 53 5 97 0 161 3 152 204 OGY64120.1 MAG: hypothetical protein A3B92_01065 [Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_42_16] diamond 159 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_42_16
30327981 30327981 PRJNA340009_P_NODE_58312_length_171_cov_3.475410_g58005_i0 PRJNA340009 58312 171 3.47541 5.9429511 Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_ 2528272 Bacteria Bacteria 47 4.41e-4   NR OGY64901.1 1798403 g58005 i0 88 0.43859649122807 25 3 43.9 0 145 71 160 184 OGY64901.1 MAG: replicative DNA helicase [Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_40_20] diamond 75 47 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_40_20
31876260 31876260 PRJNA340009_P_NODE_61257_length_167_cov_3.593220_g60950_i0 PRJNA340009 61257 167 3.59322 6.0006774 Candidatus Harrisonbacteria bacterium 2528272 Bacteria Bacteria 97.1 8.499999999999999e-24   NR MBI3046607.1 2528272 g60950 i0 85.5 0.988023952095808 55 8 98.8 0 165 1 36 90 MBI3046607.1 50S ribosomal protein L22 [Candidatus Harrisonbacteria bacterium] diamond 165 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium
32097799 32097799 PRJNA340009_P_NODE_51438_length_181_cov_2.181818_g51131_i0 PRJNA340009 51438 181 2.181818 3.94909058 Candidatus Harrisonbacteria bacterium CG1 2528272 Bacteria Bacteria 69.3 3.3e-12   NR PIT92581.1 1974584 g51131 i0 62.7 2.96685082872928 59 22 97.8 0 2 178 12 70 PIT92581.1 MAG: metal ABC transporter permease [Candidatus Harrisonbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_42_17] diamond 537 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_42_17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;