RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA340009" and tax_clade = "core chlorophytes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 28 ✖

bioproject 1

  • PRJNA340009 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17647513 17647513 PRJNA340009_P_NODE_13694_length_317_cov_19.410448_g13387_i0 PRJNA340009 13694 317 19.410448 61.53112016 Chlorellaceae 35461 Plants Plants 122 1.35e-29   NR KAL4858421.1 3077 g13387 i0 71.6 3.07570977917981 81 23 76.7 0 23 265 254 334 KAL4858421.1 40S ribosomal protein S4 [Chlorella vulgaris] diamond 975 123 0.991869918699187 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
26979755 26979755 PRJNA340009_P_NODE_60362_length_168_cov_73.344538_g60055_i0 PRJNA340009 60362 168 73.344538 123.21882384 Bryopsis sp. KO-2 3115439 Plants Plants 55.5 1.94e-7   NR GMH42566.1 3041901 g60055 i0 70.6 1.26785714285714 34 10 60.7 0 5 106 158 191 GMH42566.1 hypothetical protein BSKO_10485 [Bryopsis sp. KO-2023] diamond 213 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
27422592 27422592 PRJNA340009_P_NODE_58603_length_171_cov_1.672131_g58296_i0 PRJNA340009 58603 171 1.672131 2.85934401 Gloeotilopsis planctonica 34157 Plants Plants 108 8.49e-29   NR AOC61551.1 34157 g58296 i0 91.2 3 57 5 100 0 1 171 33 89 AOC61551.1 ribosomal protein S12 [Gloeotilopsis planctonica] diamond 513 108 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Ulotrichaceae Gloeotilopsis Gloeotilopsis planctonica
27580184 27580184 PRJNA340009_P_NODE_69704_length_164_cov_0.886957_g69397_i0 PRJNA340009 69704 164 0.886957 1.45460948 Coccomyxa sp. Obi 2315456 Plants Plants 59.7 1.32e-8   NR BDA44255.1 2315456 g69397 i0 61.4 1.60975609756098 44 16 78.7 1 3 131 282 325 BDA44255.1 probable protein ENHANCED DISEASE RESISTANCE 2 at C-terminar half [Coccomyxa sp. Obi] diamond 264 59.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
27580186 27580186 PRJNA340009_P_NODE_71964_length_163_cov_0.894737_g71657_i0 PRJNA340009 71964 163 0.894737 1.45842131 Haematococcus lacustris 44745 Plants Plants 48.5 1.17e-4   NR KAJ9519998.1 44745 g71657 i0 45.1 1.87730061349693 51 28 93.9 0 4 156 1829 1879 KAJ9519998.1 hypothetical protein QJQ45_014723, partial [Haematococcus lacustris] diamond 306 48.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28369508 28369508 PRJNA340009_P_NODE_44806_length_191_cov_22.021127_g44499_i0 PRJNA340009 44806 191 22.021127 42.06035257 Coccomyxa sp. Obi 2315456 Plants Plants 53.1 1.24e-6   NR BDA42369.1 2315456 g44499 i0 57.8 0.706806282722513 45 19 70.7 0 188 54 98 142 BDA42369.1 40S ribosomal protein S19 [Coccomyxa sp. Obi] diamond 135 53.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
28559210 28559210 PRJNA340009_P_NODE_67787_length_165_cov_0.879310_g67480_i0 PRJNA340009 67787 165 0.87931 1.4508615 Picochlorum sp. BPE23 2696299 Plants Plants 108 6.13e-26   NR KAI8106553.1 2696299 g67480 i0 96.3 0.981818181818182 54 2 98.2 0 163 2 869 922 KAI8106553.1 hypothetical protein M9435_001096 [Picochlorum sp. BPE23] diamond 162 108 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
28590778 28590778 PRJNA340009_P_NODE_79807_length_154_cov_5.352381_g79500_i0 PRJNA340009 79807 154 5.352381 8.24266674 [Myrmecia] bisecta 41462 Plants Plants 60.1 2.86e-9   NR KAK9818416.1 41462 g79500 i0 87.1 1.18831168831169 31 4 60.4 0 40 132 162 192 KAK9818416.1 hypothetical protein WJX72_012350 [[Myrmecia] bisecta] diamond 183 60.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
28622332 28622332 PRJNA340009_P_NODE_72807_length_162_cov_3.805310_g72500_i0 PRJNA340009 72807 162 3.80531 6.1646022 Chlamydomonas eustigma 1157962 Plants Plants 70.1 1.45e-12   NR GAX74018.1 1157962 g72500 i0 91.2 0.62962962962963 34 3 63 0 162 61 241 274 GAX74018.1 hypothetical protein CEUSTIGMA_g1468.t1 [Chlamydomonas eustigma] diamond 102 70.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
28828677 28828677 PRJNA340009_P_NODE_43768_length_193_cov_11.125000_g43461_i0 PRJNA340009 43768 193 11.125 21.47125 Trebouxiaceae 2507902 Plants Plants 45.4 7.09e-4   NR WPT16014.1 1470871 g43461 i0 55.3 2.58031088082902 38 17 59.1 0 175 62 85 122 WPT16014.1 60S ribosomal protein L36-3 [Picochlorum sp. SENEW3] diamond 498 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
29474364 29474364 PRJNA340009_P_NODE_17250_length_287_cov_21.802521_g16943_i0 PRJNA340009 17250 287 21.802521 62.57323527 Chlamydomonas incerta 51695 Plants Plants 52.8 8.51e-6   NR KAG2430920.1 51695 g16943 i0 67.6 0.355400696864112 34 11 35.5 0 219 118 147 180 KAG2430920.1 hypothetical protein HXX76_009892 [Chlamydomonas incerta] diamond 102 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
29965648 29965648 PRJNA340009_P_NODE_72911_length_162_cov_2.707965_g72604_i0 PRJNA340009 72911 162 2.707965 4.3869033 Chlorophyceae 3166 Plants Plants 68.6 7.46e-13   NR XP_013895602.1 145388 g72604 i0 72.1 2.40740740740741 43 12 79.6 0 162 34 96 138 XP_013895602.1 ATP-binding cassette, sub-family F, member 2 [Monoraphidium neglectum] diamond 390 68.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
30091746 30091746 PRJNA340009_P_NODE_74292_length_162_cov_0.902655_g73985_i0 PRJNA340009 74292 162 0.902655 1.4623011 Chlorellaceae 35461 Plants Plants 85.1 1.38e-17   NR RMZ56664.1 3075 g73985 i0 68.5 7 54 17 100 0 1 162 399 452 RMZ56664.1 hypothetical protein APUTEX25_002753, partial [Auxenochlorella protothecoides] diamond 1134 85.5 0.9953216374269 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30723793 30723793 PRJNA340009_P_NODE_40734_length_199_cov_30.593333_g40427_i0 PRJNA340009 40734 199 30.593333 60.88073267 Halimedaceae 379500 Plants Plants 85.5 1.1e-18   NR AOP19077.1 118222 g40427 i0 61.5 1.95979899497487 65 25 98 0 197 3 140 204 AOP19077.1 hypothetical protein [Halimeda discoidea] diamond 390 86.3 0.990730011587486 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Halimeda Halimeda discoidea
30881754 30881754 PRJNA340009_P_NODE_20534_length_267_cov_1.600917_g20227_i0 PRJNA340009 20534 267 1.600917 4.27444839 Eukaryota 2759 Plants Plants 68.6 1.22e-12   NR KAK9811884.1 41462 g20227 i0 50 3.52808988764045 62 29 69.7 1 16 201 31 90 KAK9811884.1 hypothetical protein WJX72_011786 [[Myrmecia] bisecta] diamond 942 68.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
30927934 30927934 PRJNA340009_P_NODE_38534_length_204_cov_4.877419_g38227_i0 PRJNA340009 38534 204 4.877419 9.94993476 Tupiella akineta 160070 Plants Plants 45.4 0.00243   NR YP_025764.1 160070 g38227 i0 68 0.367647058823529 25 8 36.8 0 199 125 342 366 YP_025764.1 putative site-specific DNA endonuclease [Tupiella akineta] diamond 75 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Tupiellaceae Tupiella Tupiella akineta
31117086 31117086 PRJNA340009_P_NODE_49235_length_184_cov_17.044444_g48928_i0 PRJNA340009 49235 184 17.044444 31.36177696 Chlamydomonas sp. UWO 241 1653778 Plants Plants 64.3 3.1e-11   NR KAG1669065.1 1653778 g48928 i0 100 1.56521739130435 32 0 52.2 0 183 88 98 129 KAG1669065.1 hypothetical protein FOA52_003983 [Chlamydomonas sp. UWO 241] diamond 288 64.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
31148499 31148499 PRJNA340009_P_NODE_20795_length_265_cov_14.361111_g20488_i0 PRJNA340009 20795 265 14.361111 38.05694415 [Myrmecia] bisecta 41462 Plants Plants 47.8 4.39e-4   NR KAK9816602.1 41462 g20488 i0 71 0.350943396226415 31 9 35.1 0 170 78 151 181 KAK9816602.1 hypothetical protein WJX72_002600 [[Myrmecia] bisecta] diamond 93 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
31180226 31180226 PRJNA340009_P_NODE_50755_length_182_cov_2.263158_g50448_i0 PRJNA340009 50755 182 2.263158 4.11894756 Sarcinofilum mucosum 141643 Plants Plants 67.4 3.34e-11   NR YP_009367396.1 141643 g50448 i0 59.6 0.93956043956044 57 23 94 0 3 173 583 639 YP_009367396.1 beta'' subunit of RNA polymerase [Sarcinofilum mucosum] diamond 171 67.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Sarcinofilaceae Sarcinofilum Sarcinofilum mucosum
31292566 31292566 PRJNA340009_P_NODE_25975_length_241_cov_98.645833_g25668_i0 PRJNA340009 25975 241 98.645833 237.73645753 Chlamydomonadaceae 3051 Plants Plants 63.9 3.65e-10   NR GAX77325.1 1157962 g25668 i0 84.2 0.95850622406639 38 6 47.3 0 201 88 167 204 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 231 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
31307012 31307012 PRJNA340009_P_NODE_70775_length_163_cov_1.763158_g70468_i0 PRJNA340009 70775 163 1.763158 2.87394754 Chlorella variabilis 554065 Plants Plants 46.6 4.02e-4   NR XP_005852074.1 554065 g70468 i0 46.8 2.57668711656442 47 25 86.5 0 12 152 152 198 XP_005852074.1 hypothetical protein CHLNCDRAFT_133084 [Chlorella variabilis] diamond 420 46.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
31560284 31560284 PRJNA340009_P_NODE_61116_length_167_cov_21.067797_g60809_i0 PRJNA340009 61116 167 21.067797 35.18322099 Ulva compressa 63659 Plants Plants 45.8 2.26e-4   NR Q9LRB8.1 63659 g60809 i0 82.1 0.502994011976048 28 5 50.3 0 29 112 74 101 Q9LRB8.1 RecName: Full=Large ribosomal subunit protein eL36; AltName: Full=60S ribosomal protein L36 [Ulva compressa] diamond 84 45.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva compressa
31560300 31560300 PRJNA340009_P_NODE_7296_length_410_cov_11.759003_g6989_i0 PRJNA340009 7296 410 11.759003 48.2119123 Haematococcus lacustris 44745 Plants Plants 63.2 1.12e-9   NR GFH13482.1 44745 g6989 i0 49.2 2.42926829268293 65 32 46.8 1 265 74 39 103 GFH13482.1 uncharacterized protein HaLaN_09375 [Haematococcus lacustris] diamond 996 63.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31749716 31749716 PRJNA340009_P_NODE_69397_length_164_cov_0.886957_g69090_i0 PRJNA340009 69397 164 0.886957 1.45460948 Tetradesmus obliquus 3088 Plants Plants 50.1 3.33e-5   NR WIA41016.1 3088 g69090 i0 57.1 1.26219512195122 35 15 64 0 148 44 1223 1257 WIA41016.1 hypothetical protein OEZ86_004655 [Tetradesmus obliquus] diamond 207 50.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
31830151 31830151 PRJNA340009_P_NODE_37077_length_207_cov_54.721519_g36770_i0 PRJNA340009 37077 207 54.721519 113.27354432999999 Eukaryota 2759 Plants Plants 51.2 2.42e-5   NR KAL4437043.1 2728915 g36770 i0 60.5 1.63768115942029 38 15 55.1 0 177 64 560 597 KAL4437043.1 hypothetical protein ABPG75_004182 [Micractinium tetrahymenae] diamond 339 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium tetrahymenae
31844610 31844610 PRJNA340009_P_NODE_25497_length_243_cov_18.448454_g25190_i0 PRJNA340009 25497 243 18.448454 44.82974322 Tetrabaena socialis 47790 Plants Plants 48.1 3.56e-5   NR PNH02796.1 47790 g25190 i0 65.9 0.506172839506173 41 14 50.6 0 1 123 27 67 PNH02796.1 hypothetical protein TSOC_011197 [Tetrabaena socialis] diamond 123 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
31844662 31844662 PRJNA340009_P_NODE_75357_length_161_cov_2.678571_g75050_i0 PRJNA340009 75357 161 2.678571 4.31249931 Tupiella akineta 160070 Plants Plants 66.2 6.25e-11   NR YP_636192.1 160070 g75050 i0 64.6 0.894409937888199 48 17 89.4 0 16 159 175 222 YP_636192.1 cell division protein [Tupiella akineta] diamond 144 66.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulotrichales Tupiellaceae Tupiella Tupiella akineta
32824382 32824382 PRJNA340009_P_NODE_70720_length_163_cov_1.789474_g70413_i0 PRJNA340009 70720 163 1.789474 2.91684262 Pedinomonas tuberculata 160064 Plants Plants 42 0.0242   NR YP_009105313.1 160064 g70413 i0 53.1 0.901840490797546 49 23 90.2 0 2 148 46 94 YP_009105313.1 putative reverse transcriptase and intron maturase [Pedinomonas tuberculata] diamond 147 42 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae Pedinomonadales Pedinomonadaceae Pedinomonas Pedinomonas tuberculata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;