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contig_metadata

73 rows where analysis = "diamond", bioproject = "PRJNA339266" and tax_phylum = "Pseudomonadota"

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tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 73 ✖

tax_kingdom 1

bioproject 1

  • PRJNA339266 · 73 ✖

analysis 1

  • diamond · 73 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9319379 9319379 PRJNA339266_P_NODE_8548_length_151_cov_4.245614_g8518_i0 PRJNA339266 8548 151 4.245614 6.41087714 Alphaproteobacteria 28211 Bacteria Bacteria 73.2 1.97e-13   NR WP_126176212.1 1708790 g8518 i0 82 2.98013245033113 50 9 99.3 0 2 151 237 286 WP_126176212.1 phytoene desaturase family protein [Tsuneonella rigui] diamond 450 73.9 0.990527740189445 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Tsuneonella Tsuneonella rigui
11870267 11870267 PRJNA339266_S_NODE_6570_length_200_cov_2.944785_g6559_i0 PRJNA339266 6570 200 2.944785 5.88957 Oxalobacteraceae bacterium 1871070 Bacteria Bacteria 146 1.33e-43   NR RYE89971.1 1871070 g6559 i0 100 1.98 66 0 99 0 199 2 17 82 RYE89971.1 MAG: endonuclease, partial [Oxalobacteraceae bacterium] diamond 396 146 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae   Oxalobacteraceae bacterium
13823305 13823305 PRJNA339266_P_NODE_2931_length_208_cov_1.836257_g2901_i0 PRJNA339266 2931 208 1.836257 3.81941456 Methylobacterium 407 Bacteria Bacteria 116 6.2899999999999995e-30   NR WP_238277283.1 407 g2901 i0 80.3 1.09615384615385 76 7 98.1 1 206 3 95 170 WP_238277283.1 MULTISPECIES: NAD(+) diphosphatase [Methylobacterium] diamond 228 116 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium  
15097667 15097667 PRJNA339266_P_NODE_92_length_515_cov_122.332636_g74_i0 PRJNA339266 92 515 122.332636 630.0130754 Caballeronia sp. dw_276 2719795 Bacteria Bacteria 271 1.94e-86   NR WP_213776318.1 2719795 g74 i0 82.9 3.00582524271845 175 20 96.1 1 499 5 266 440 WP_213776318.1 MFS transporter [Caballeronia sp. dw_276] diamond 1548 271 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Caballeronia Caballeronia sp. dw_276
15694308 15694308 PRJNA339266_S_NODE_7293_length_194_cov_5.089172_g7282_i0 PRJNA339266 7293 194 5.089172 9.87299368 Pseudomonadota bacterium 1977087 Bacteria Bacteria 129 3.92e-33   NR MEW6597375.1 1977087 g7282 i0 100 0.989690721649485 64 0 99 0 194 3 518 581 MEW6597375.1 acyl-CoA dehydrogenase C-terminal domain-containing protein [Pseudomonadota bacterium] diamond 192 129 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
16372457 16372457 PRJNA339266_S_NODE_3273_length_238_cov_3.218905_g3262_i0 PRJNA339266 3273 238 3.218905 7.6609939 Sphingomonas sp. Leaf412 1736370 Bacteria Bacteria 74.3 2.43e-13   NR WP_055981925.1 1736370 g3262 i0 49.3 0.945378151260504 75 38 94.5 0 5 229 312 386 WP_055981925.1 hypothetical protein [Sphingomonas sp. Leaf412] diamond 225 74.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. Leaf412
16968717 16968717 PRJNA339266_P_NODE_7454_length_160_cov_29.658537_g7424_i0 PRJNA339266 7454 160 29.658537 47.4536592 Alphaproteobacteria 28211 Bacteria Bacteria 88.6 5.4400000000000005e-21   NR WP_067397956.1 1472418 g7424 i0 73.5 4.55625 49 13 91.9 0 10 156 42 90 WP_067397956.1 transcription termination/antitermination protein NusG, partial [Falsirhodobacter sp. alg1] diamond 729 88.6 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Falsirhodobacter Falsirhodobacter sp. alg1
20792669 20792669 PRJNA339266_P_NODE_117_length_476_cov_67.416856_g98_i0 PRJNA339266 117 476 67.416856 320.90423456 Pseudomonadota bacterium 1977087 Bacteria Bacteria 234 4.39e-76   NR MBS0421263.1 1977087 g98 i0 94.8 0.724789915966387 115 6 72.5 0 474 130 72 186 MBS0421263.1 cbb3-type cytochrome c oxidase subunit I [Pseudomonadota bacterium] diamond 345 234 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
23343345 23343345 PRJNA339266_S_NODE_12899_length_168_cov_2.022901_g12888_i0 PRJNA339266 12899 168 2.022901 3.39847368 Qipengyuania 1855416 Bacteria Bacteria 113 1.3600000000000002e-27   NR WP_133364622.1 1532023 g12888 i0 89.1 2.94642857142857 55 6 98.2 0 167 3 306 360 WP_133364622.1 GMC family oxidoreductase [Qipengyuania sediminis] diamond 495 114 0.991228070175439 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Qipengyuania Qipengyuania sediminis
26617096 26617096 PRJNA339266_P_NODE_4301_length_190_cov_3.026144_g4271_i0 PRJNA339266 4301 190 3.026144 5.7496736 Alphaproteobacteria 28211 Bacteria Bacteria 44.7 0.00389   NR WP_264074036.1 1076 g4271 i0 67.9 1.32631578947368 28 9 44.2 0 85 2 171 198 WP_264074036.1 lipopolysaccharide biosynthesis protein [Rhodopseudomonas palustris] diamond 252 44.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas palustris
26631540 26631540 PRJNA339266_S_NODE_12961_length_168_cov_1.587786_g12950_i0 PRJNA339266 12961 168 1.587786 2.66748048 Pseudomonas aeruginosa 287 Bacteria Bacteria 87.4 5.31e-20   NR WP_308699894.1 287 g12950 i0 72.2 1.91071428571429 54 15 96.4 0 3 164 109 162 WP_308699894.1 ribonuclease H family protein, partial [Pseudomonas aeruginosa] diamond 321 87.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
26694717 26694717 PRJNA339266_P_NODE_1781_length_235_cov_19.939394_g1751_i0 PRJNA339266 1781 235 19.939394 46.8575759 Pseudomonas syringae group genomosp. 7 251699 Bacteria Bacteria 42 0.00944   NR MFH7416548.1 129140 g1751 i0 40.9 0.842553191489362 66 28 74 4 182 9 7 69 MFH7416548.1 hypothetical protein [Pseudomonas syringae pv. tagetis] diamond 198 42 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae group genomosp. 7
26885006 26885006 PRJNA339266_P_NODE_3521_length_199_cov_2.666667_g3491_i0 PRJNA339266 3521 199 2.666667 5.30666733 Paracoccus yeei 147645 Bacteria Bacteria 79 2.17e-15   NR WP_158212804.1 147645 g3491 i0 53 1.50753768844221 100 13 99.5 2 199 2 44 143 WP_158212804.1 hypothetical protein, partial [Paracoccus yeei] diamond 300 79 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paracoccus Paracoccus yeei
26916467 26916467 PRJNA339266_S_NODE_16702_length_157_cov_2.416667_g16691_i0 PRJNA339266 16702 157 2.416667 3.79416719 Alloalcanivorax gelatiniphagus 1194167 Bacteria Bacteria 57 1.07e-7   NR GAA5108489.1 1194167 g16691 i0 69 0.802547770700637 42 13 80.3 0 127 2 41 82 GAA5108489.1 DUF1205 domain-containing protein [Alloalcanivorax gelatiniphagus] diamond 126 57 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales Alcanivoracaceae Alloalcanivorax Alloalcanivorax gelatiniphagus
26916472 26916472 PRJNA339266_S_NODE_7102_length_196_cov_1.591195_g7091_i0 PRJNA339266 7102 196 1.591195 3.1187422 Thermomonas hydrothermalis 213588 Bacteria Bacteria 92 1.94e-22   NR WP_273387333.1 213588 g7091 i0 100 0.76530612244898 50 0 76.5 0 150 1 16 65 WP_273387333.1 PepSY domain-containing protein [Thermomonas hydrothermalis] diamond 150 92 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Thermomonas Thermomonas hydrothermalis
26948006 26948006 PRJNA339266_S_NODE_1442_length_292_cov_1.643137_g1431_i0 PRJNA339266 1442 292 1.643137 4.79796004 Ectopseudomonas guguanensis 1198456 Bacteria Bacteria 156 9.57e-46   NR WP_409773643.1 1198456 g1431 i0 70.5 0.976027397260274 95 28 97.6 0 6 290 25 119 WP_409773643.1 HNH endonuclease [Ectopseudomonas guguanensis] diamond 285 156 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Ectopseudomonas Ectopseudomonas guguanensis
27232680 27232680 PRJNA339266_P_NODE_7943_length_155_cov_15.364407_g7913_i0 PRJNA339266 7943 155 15.364407 23.81483085 Sphingomonas sp. Ag1 1642949 Bacteria Bacteria 47.8 5.9e-5   NR WP_046407321.1 1642949 g7913 i0 92.9 3.30967741935484 28 2 54.2 0 85 2 93 120 WP_046407321.1 hypothetical protein, partial [Sphingomonas sp. Ag1] diamond 513 47.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. Ag1
27249965 27249965 PRJNA339266_P_NODE_6663_length_170_cov_2.150376_g6633_i0 PRJNA339266 6663 170 2.150376 3.6556392 Bosea 85413 Bacteria Bacteria 45.1 0.00123   NR WP_152014267.1 2653178 g6633 i0 53.8 1.37647058823529 39 18 68.8 0 23 139 70 108 WP_152014267.1 MULTISPECIES: hypothetical protein [unclassified Bosea (in: a-proteobacteria)] diamond 234 45.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea  
27390930 27390930 PRJNA339266_S_NODE_14823_length_162_cov_2.184000_g14812_i0 PRJNA339266 14823 162 2.184 3.53808 Pseudomonas aeruginosa 287 Bacteria Bacteria 63.9 7.23e-12   NR WP_366964873.1 287 g14812 i0 96.6 0.537037037037037 29 1 53.7 0 3 89 30 58 WP_366964873.1 reverse transcriptase domain-containing protein, partial [Pseudomonas aeruginosa] diamond 87 63.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
27471279 27471279 PRJNA339266_S_NODE_11003_length_175_cov_2.500000_g10992_i0 PRJNA339266 11003 175 2.5 4.375 Pseudomonas 286 Bacteria Bacteria 61.2 3.38e-9   NR HCT07506.1 306 g10992 i0 90.9 9.54857142857143 33 3 56.6 0 3 101 262 294 HCT07506.1 hypothetical protein [Pseudomonas sp.] diamond 1671 61.6 0.993506493506494 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp.
27517064 27517064 PRJNA339266_S_NODE_7603_length_192_cov_3.858065_g7592_i0 PRJNA339266 7603 192 3.858065 7.4074848 Klebsiella pneumoniae 573 Bacteria Bacteria 51.6 1.16e-6   NR WP_408357587.1 573 g7592 i0 92.3 0.40625 26 2 40.6 0 1 78 24 49 WP_408357587.1 hypothetical protein, partial [Klebsiella pneumoniae] diamond 78 51.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
27548585 27548585 PRJNA339266_S_NODE_17384_length_155_cov_3.813559_g17373_i0 PRJNA339266 17384 155 3.813559 5.91101645 Wolbachia endosymbiont of Drosophila ananassae 307502 Bacteria Bacteria 54.7 6.53e-7   NR EAL59155.1 307502 g17373 i0 68.6 2.41935483870968 35 11 67.7 0 154 50 112 146 EAL59155.1 transposase [Wolbachia endosymbiont of Drosophila ananassae] diamond 375 54.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rickettsiales Anaplasmataceae Wolbachia Wolbachia endosymbiont of Drosophila ananassae
27580139 27580139 PRJNA339266_S_NODE_20104_length_150_cov_1.017699_g20093_i0 PRJNA339266 20104 150 1.017699 1.5265485 Pseudomonas sp. JUb42 2940611 Bacteria Bacteria 53.1 2.16e-6   NR WP_259105034.1 2940611 g20093 i0 96.3 1.62 27 1 54 0 148 68 515 541 WP_259105034.1 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Pseudomonas sp. JUb42] diamond 243 53.1 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp. JUb42
27611893 27611893 PRJNA339266_S_NODE_18944_length_152_cov_1.791304_g18933_i0 PRJNA339266 18944 152 1.791304 2.72278208 Thiomicrorhabdus marina 2818442 Bacteria Bacteria 69.3 4.47e-12   NR WP_208148182.1 2818442 g18933 i0 64 0.986842105263158 50 18 98.7 0 151 2 544 593 WP_208148182.1 excinuclease ABC subunit UvrC [Thiomicrorhabdus marina] diamond 150 69.3 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Thiotrichales Piscirickettsiaceae Thiomicrorhabdus Thiomicrorhabdus marina
27769875 27769875 PRJNA339266_P_NODE_4064_length_192_cov_14.535484_g4034_i0 PRJNA339266 4064 192 14.535484 27.90812928 Sphingomonas sp. IC-11 2898528 Bacteria Bacteria 73.9 2.18e-14   NR WP_231024058.1 2898528 g4034 i0 76.4 1.71875 55 13 85.9 0 166 2 8 62 WP_231024058.1 tail tape measure protein [Sphingomonas sp. IC-11] diamond 330 73.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. IC-11
28022387 28022387 PRJNA339266_S_NODE_14325_length_163_cov_6.341270_g14314_i0 PRJNA339266 14325 163 6.34127 10.3362701 Haemophilus parainfluenzae 729 Bacteria Bacteria 43.1 9.82e-4   NR MBS5005378.1 729 g14314 i0 89.5 0.699386503067485 19 2 35 0 58 2 1 19 MBS5005378.1 hypothetical protein [Haemophilus parainfluenzae] diamond 114 43.1 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Haemophilus parainfluenzae
28022388 28022388 PRJNA339266_S_NODE_15645_length_160_cov_1.317073_g15634_i0 PRJNA339266 15645 160 1.317073 2.1073168 Sphingomonas sp. GCM1 28214 Bacteria Bacteria 41.6 0.0304   NR WP_380810606.1 3273427 g15634 i0 73.9 0.43125 23 6 43.1 0 160 92 217 239 WP_380810606.1 hypothetical protein [Sphingomonas sp. GCM10030256] diamond 69 41.6 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. GCM10030256
28211471 28211471 PRJNA339266_S_NODE_16846_length_157_cov_1.291667_g16835_i0 PRJNA339266 16846 157 1.291667 2.02791719 Betaproteobacteria bacterium 1891241 Bacteria Bacteria 41.2 0.0185   NR MBL0124242.1 1891241 g16835 i0 45.9 0.707006369426752 37 20 70.7 0 149 39 79 115 MBL0124242.1 hypothetical protein [Betaproteobacteria bacterium] diamond 111 41.2 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria       Betaproteobacteria bacterium
28418591 28418591 PRJNA339266_P_NODE_8246_length_153_cov_3.913793_g8216_i0 PRJNA339266 8246 153 3.913793 5.98810329 Bacteria 2 Bacteria Bacteria 48.9 7.12e-5   NR OGT47010.1 1798278 g8216 i0 58.1 50.0588235294118 43 14 76.5 1 118 2 433 475 OGT47010.1 MAG: hypothetical protein A3E82_01960 [Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11] diamond 7659 48.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_38_11
28464372 28464372 PRJNA339266_S_NODE_2686_length_250_cov_4.525822_g2675_i0 PRJNA339266 2686 250 4.525822 11.314555 Shigella sonnei 624 Bacteria Bacteria 92.4 5.51e-22   NR WP_353799277.1 624 g2675 i0 88.9 6.576 54 6 64.8 0 243 82 17 70 WP_353799277.1 reverse transcriptase domain-containing protein, partial [Shigella sonnei] diamond 1644 93.2 0.991416309012876 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella sonnei
28559161 28559161 PRJNA339266_S_NODE_947_length_324_cov_10.365854_g936_i0 PRJNA339266 947 324 10.365854 33.58536696 Sphingomonas humi 335630 Bacteria Bacteria 172 1.67e-51   NR WP_344708259.1 335630 g936 i0 81.7 0.962962962962963 104 18 95.4 1 16 324 8 111 WP_344708259.1 dienelactone hydrolase family protein [Sphingomonas humi] diamond 312 172 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas humi
28748413 28748413 PRJNA339266_S_NODE_6427_length_201_cov_3.237805_g6416_i0 PRJNA339266 6427 201 3.237805 6.50798805 Pseudomonas aeruginosa 287 Bacteria Bacteria 79.7 6.12e-18   NR MEW3929481.1 287 g6416 i0 97.4 0.567164179104478 38 1 56.7 0 115 2 1 38 MEW3929481.1 hypothetical protein [Pseudomonas aeruginosa] diamond 114 79.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
28986971 28986971 PRJNA339266_P_NODE_8468_length_152_cov_1.426087_g8438_i0 PRJNA339266 8468 152 1.426087 2.16765224 Methylotenera 359407 Bacteria Bacteria 73.9 1.06e-13   NR WP_015831730.1 359408 g8438 i0 79.2 6.73026315789474 48 10 94.7 0 146 3 694 741 WP_015831730.1 retention module-containing protein [Methylotenera mobilis] diamond 1023 73.9 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylotenera Methylotenera mobilis
29095865 29095865 PRJNA339266_P_NODE_3608_length_198_cov_1.447205_g3578_i0 PRJNA339266 3608 198 1.447205 2.8654659 Burkholderia multivorans 87883 Bacteria Bacteria 107 8.16e-28   NR MDN7654318.1 87883 g3578 i0 92.6 0.818181818181818 54 4 81.8 0 172 11 1 54 MDN7654318.1 hypothetical protein [Burkholderia multivorans] diamond 162 107 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia multivorans
29222229 29222229 PRJNA339266_P_NODE_3489_length_199_cov_4.950617_g3459_i0 PRJNA339266 3489 199 4.950617 9.85172783 Qipengyuania sp. 2004515 Bacteria Bacteria 110 6.22e-29   NR HEU4819658.1 2004515 g3459 i0 94.6 0.844221105527638 56 3 84.4 0 3 170 118 173 HEU4819658.1 YdcF family protein [Qipengyuania sp.] diamond 168 110 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Qipengyuania Qipengyuania sp.
29379884 29379884 PRJNA339266_P_NODE_469_length_333_cov_4.037162_g440_i0 PRJNA339266 469 333 4.037162 13.44374946 Rhizomicrobium sp. 1978228 Bacteria Bacteria 127 1.61e-32   NR HEY8947643.1 1978228 g440 i0 75 0.720720720720721 80 20 72.1 0 247 8 29 108 HEY8947643.1 membrane dipeptidase [Rhizomicrobium sp.] diamond 240 127 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Micropepsales Micropepsaceae Rhizomicrobium Rhizomicrobium sp.
29442819 29442819 PRJNA339266_S_NODE_19450_length_151_cov_1.842105_g19439_i0 PRJNA339266 19450 151 1.842105 2.78157855 Klebsiella pneumoniae 573 Bacteria Bacteria 60.8 3.15e-9   NR EKV6694358.1 573 g19439 i0 50 2.68211920529801 44 21 87.4 1 143 12 232 274 EKV6694358.1 hypothetical protein [Klebsiella pneumoniae] diamond 405 60.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
29474354 29474354 PRJNA339266_S_NODE_13670_length_165_cov_4.976562_g13659_i0 PRJNA339266 13670 165 4.976562 8.2113273 Herminiimonas contaminans 1111140 Bacteria Bacteria 93.6 5.389999999999999e-23   NR WP_195875832.1 1111140 g13659 i0 90.6 0.963636363636364 53 5 96.4 0 2 160 27 79 WP_195875832.1 DUF4282 domain-containing protein [Herminiimonas contaminans] diamond 159 93.6 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Herminiimonas Herminiimonas contaminans
29569285 29569285 PRJNA339266_S_NODE_7070_length_196_cov_2.283019_g7059_i0 PRJNA339266 7070 196 2.283019 4.47471724 Escherichia coli 562 Bacteria Bacteria 51.2 1.25e-6   NR WP_235640640.1 562 g7059 i0 79.3 0.443877551020408 29 6 44.4 0 119 33 1 29 WP_235640640.1 hypothetical protein, partial [Escherichia coli] diamond 87 51.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
29821692 29821692 PRJNA339266_S_NODE_71_length_635_cov_89.050167_g64_i0 PRJNA339266 71 635 89.050167 565.46856045 Shigella sonnei 624 Bacteria Bacteria 85.9 4.34e-18   NR WP_353763804.1 624 g64 i0 95.6 0.21259842519685 45 2 21.3 0 306 440 38 82 WP_353763804.1 hypothetical protein, partial [Shigella sonnei] diamond 135 85.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella sonnei
29934145 29934145 PRJNA339266_P_NODE_8711_length_150_cov_4.079646_g8681_i0 PRJNA339266 8711 150 4.079646 6.119469 Bacteria 2 Bacteria Bacteria 50.8 1.42e-5   NR MBV9569679.1 1913988 g8681 i0 78.1 12.28 32 7 64 0 3 98 251 282 MBV9569679.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE [Alphaproteobacteria bacterium] diamond 1842 50.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
30137483 30137483 PRJNA339266_P_NODE_5512_length_183_cov_5.452055_g5482_i0 PRJNA339266 5512 183 5.452055 9.97726065 Steroidobacteraceae bacterium 2689616 Bacteria Bacteria 47.8 2.92e-4   NR HTJ17161.1 2689616 g5482 i0 76 0.409836065573771 25 6 41 0 109 183 359 383 HTJ17161.1 alpha,alpha-trehalase TreF [Steroidobacteraceae bacterium] diamond 75 47.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Steroidobacterales Steroidobacteraceae   Steroidobacteraceae bacterium
30232640 30232640 PRJNA339266_S_NODE_15032_length_161_cov_4.701613_g15021_i0 PRJNA339266 15032 161 4.701613 7.56959693 Methylobacterium 407 Bacteria Bacteria 115 2.18e-30   NR WP_238273953.1 407 g15021 i0 100 0.987577639751553 53 0 98.8 0 3 161 169 221 WP_238273953.1 MULTISPECIES: hypothetical protein [Methylobacterium] diamond 159 115 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium  
30264560 30264560 PRJNA339266_P_NODE_7772_length_157_cov_3.275000_g7742_i0 PRJNA339266 7772 157 3.275 5.14175 Sphingomonas sp. ACRSK 2918213 Bacteria Bacteria 50.1 2.59e-5   NR WP_239435579.1 2918213 g7742 i0 100 0.45859872611465 24 0 45.9 0 74 3 94 117 WP_239435579.1 phosphatidate cytidylyltransferase [Sphingomonas sp. ACRSK] diamond 72 50.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. ACRSK
30327933 30327933 PRJNA339266_S_NODE_14472_length_163_cov_2.523810_g14461_i0 PRJNA339266 14472 163 2.52381 4.1138103 Achromobacter spanius 217203 Bacteria Bacteria 90.9 8.030000000000001e-21   NR WP_127184868.1 217203 g14461 i0 75 0.957055214723926 52 13 95.7 0 160 5 172 223 WP_127184868.1 TIR domain-containing protein [Achromobacter spanius] diamond 156 90.9 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter spanius
30391094 30391094 PRJNA339266_S_NODE_10813_length_176_cov_1.834532_g10802_i0 PRJNA339266 10813 176 1.834532 3.22877632 unclassified Duganella 2636909 Bacteria Bacteria 94.4 9.01e-21   NR WP_092281301.1 2636909 g10802 i0 81 1.97727272727273 58 11 98.9 0 1 174 137 194 WP_092281301.1 MULTISPECIES: recombinase family protein [unclassified Duganella] diamond 348 94.4 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Duganella  
30454056 30454056 PRJNA339266_S_NODE_15133_length_161_cov_2.411290_g15122_i0 PRJNA339266 15133 161 2.41129 3.8821769 Escherichia coli 562 Bacteria Bacteria 39.3 0.0411   NR WP_235640640.1 562 g15122 i0 66.7 0.559006211180124 30 10 55.9 0 157 68 3 32 WP_235640640.1 hypothetical protein, partial [Escherichia coli] diamond 90 39.3 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
30517005 30517005 PRJNA339266_S_NODE_1513_length_287_cov_37.800000_g1502_i0 PRJNA339266 1513 287 37.8 108.486 Verminephrobacter aporrectodeae 1110389 Bacteria Bacteria 107 2.91e-28   NR WP_236610800.1 1110389 g1502 i0 90.5 0.658536585365854 63 6 65.9 0 3 191 1 63 WP_236610800.1 hypothetical protein, partial [Verminephrobacter aporrectodeae] diamond 189 107 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Verminephrobacter Verminephrobacter aporrectodeae
30769894 30769894 PRJNA339266_P_NODE_3094_length_205_cov_3.059524_g3064_i0 PRJNA339266 3094 205 3.059524 6.2720242 Sphingomonas sp. ABOLG 1985880 Bacteria Bacteria 52.8 1.15e-6   NR WP_241212468.1 1985880 g3064 i0 100 0.717073170731707 25 0 36.6 0 203 129 76 100 WP_241212468.1 hypothetical protein [Sphingomonas sp. ABOLG] diamond 147 52.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. ABOLG
30801261 30801261 PRJNA339266_S_NODE_34_length_810_cov_17.855110_g30_i0 PRJNA339266 34 810 17.85511 144.626391 Shigella sonnei 624 Bacteria Bacteria 207 1.86e-64   NR WP_353763784.1 624 g30 i0 97.1 0.377777777777778 102 3 37.8 0 58 363 7 108 WP_353763784.1 hypothetical protein, partial [Shigella sonnei] diamond 306 207 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella sonnei
30818648 30818648 PRJNA339266_P_NODE_1494_length_246_cov_9.961722_g1464_i0 PRJNA339266 1494 246 9.961722 24.50583612 Bacteria 2 Bacteria Bacteria 84.7 6.49e-17   NR MEA3179672.1 1913989 g1464 i0 71.7 1.29268292682927 53 15 64.6 0 88 246 422 474 MEA3179672.1 hypothetical protein [Gammaproteobacteria bacterium] diamond 318 84.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
30818650 30818650 PRJNA339266_P_NODE_5294_length_184_cov_3.190476_g5264_i0 PRJNA339266 5294 184 3.190476 5.87047584 Pseudomonadati 3379134 Bacteria Bacteria 49.3 8.44e-5   NR MEY4508152.1 1977087 g5264 i0 95.8 0.782608695652174 24 1 39.1 0 181 110 89 112 MEY4508152.1 hypothetical protein [Pseudomonadota bacterium] diamond 144 49.3 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
30832960 30832960 PRJNA339266_S_NODE_17014_length_156_cov_3.705882_g17003_i0 PRJNA339266 17014 156 3.705882 5.78117592 Sphingomonadaceae bacterium 1930536 Bacteria Bacteria 43.5 0.00558   NR MBA3897439.1 1930536 g17003 i0 90.9 2.11538461538462 22 2 42.3 0 90 155 1 22 MBA3897439.1 CoA transferase subunit A [Sphingomonadaceae bacterium] diamond 330 43.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae   Sphingomonadaceae bacterium
30991059 30991059 PRJNA339266_P_NODE_6114_length_178_cov_2.361702_g6084_i0 PRJNA339266 6114 178 2.361702 4.20382956 Variovorax sp. KBW 1871043 Bacteria Bacteria 85.9 8.88e-18   NR WP_221621933.1 2153358 g6084 i0 49 1.61797752808989 96 12 99.4 1 177 1 336 431 WP_221621933.1 NtaA/DmoA family FMN-dependent monooxygenase [Variovorax sp. KBW07] diamond 288 85.9 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Variovorax Variovorax sp. KBW07
31102846 31102846 PRJNA339266_S_NODE_3395_length_235_cov_40.373737_g3384_i0 PRJNA339266 3395 235 40.373737 94.87828195 Bacteria 2 Bacteria Bacteria 79.7 1.18e-15   NR MEH8979332.1 573 g3384 i0 52.8 7.18723404255319 72 34 91.9 0 234 19 223 294 MEH8979332.1 GTPase HflX [Klebsiella pneumoniae] diamond 1689 79.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
31134266 31134266 PRJNA339266_S_NODE_15635_length_160_cov_1.439024_g15624_i0 PRJNA339266 15635 160 1.439024 2.3024384 Sphingobium 165695 Bacteria Bacteria 45.4 0.00127   NR WP_256959956.1 627495 g15624 i0 76.5 2.19375 34 7 63.8 1 54 155 11 43 WP_256959956.1 phytoene/squalene synthase family protein, partial [Sphingobium sp. Z007] diamond 351 45.8 0.991266375545852 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingobium Sphingobium sp. Z007
31148488 31148488 PRJNA339266_S_NODE_7535_length_193_cov_1.371795_g7524_i0 PRJNA339266 7535 193 1.371795 2.64756435 Halioglobus sp. 2024834 Bacteria Bacteria 42.4 0.0262   NR MEP4487178.1 2024834 g7524 i0 36.8 0.886010362694301 57 34 85.5 2 14 178 80 136 MEP4487178.1 DUF4040 domain-containing protein [Halioglobus sp.] diamond 171 42.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Halieaceae Halioglobus Halioglobus sp.
31243694 31243694 PRJNA339266_S_NODE_775_length_339_cov_37.013245_g764_i0 PRJNA339266 775 339 37.013245 125.47490055 Aeromonadaceae bacterium 1948889 Bacteria Bacteria 173 9.61e-51   NR MBP8173105.1 1948889 g764 i0 96.6 0.769911504424779 87 3 77 0 77 337 59 145 MBP8173105.1 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC [Aeromonadaceae bacterium] diamond 261 173 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae   Aeromonadaceae bacterium
31370507 31370507 PRJNA339266_S_NODE_19556_length_151_cov_1.333333_g19545_i0 PRJNA339266 19556 151 1.333333 2.01333283 Herminiimonas contaminans 1111140 Bacteria Bacteria 85.1 4.13e-18   NR WP_195875737.1 1111140 g19545 i0 85.7 0.973509933774834 49 7 97.4 0 149 3 94 142 WP_195875737.1 type II secretion system F family protein [Herminiimonas contaminans] diamond 147 85.1 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Herminiimonas Herminiimonas contaminans
31433426 31433426 PRJNA339266_P_NODE_1896_length_232_cov_1.876923_g1866_i0 PRJNA339266 1896 232 1.876923 4.35446136 Mesorhizobium alhagi 475067 Bacteria Bacteria 58.9 5.54e-8   NR WP_008840033.1 475067 g1866 i0 42.4 1.2801724137931 99 7 63.4 2 230 84 233 331 WP_008840033.1 aldo/keto reductase [Mesorhizobium alhagi] diamond 297 58.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Allomesorhizobium Allomesorhizobium alhagi
31465393 31465393 PRJNA339266_S_NODE_9136_length_184_cov_1.163265_g9125_i0 PRJNA339266 9136 184 1.163265 2.1404076 Bradyrhizobium sp. BR13661 2940622 Bacteria Bacteria 102 1.31e-24   NR WP_280710793.1 2940622 g9125 i0 100 0.831521739130435 51 0 83.2 0 182 30 241 291 WP_280710793.1 transglutaminase-like domain-containing protein [Bradyrhizobium sp. BR13661] diamond 153 102 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. BR13661
31496952 31496952 PRJNA339266_P_NODE_8676_length_150_cov_10.079646_g8646_i0 PRJNA339266 8676 150 10.079646 15.119469 Pseudomonadota bacterium 1977087 Bacteria Bacteria 74.7 3.36e-14   NR MBS0598056.1 1977087 g8646 i0 70.8 0.96 48 14 96 0 145 2 135 182 MBS0598056.1 replication C family protein [Pseudomonadota bacterium] diamond 144 74.7 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
31640513 31640513 PRJNA339266_P_NODE_7836_length_157_cov_1.075000_g7806_i0 PRJNA339266 7836 157 1.075 1.68775 Alphaproteobacteria 28211 Bacteria Bacteria 68.2 1.25e-11   NR HUO92646.1 1978228 g7806 i0 49 4.79617834394904 51 26 97.5 0 1 153 63 113 HUO92646.1 toll/interleukin-1 receptor domain-containing protein [Rhizomicrobium sp.] diamond 753 68.2 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Micropepsales Micropepsaceae Rhizomicrobium Rhizomicrobium sp.
31718212 31718212 PRJNA339266_S_NODE_357_length_416_cov_22.944591_g346_i0 PRJNA339266 357 416 22.944591 95.44949856 Shigella sonnei 624 Bacteria Bacteria 73.6 3.56e-14   NR WP_353763804.1 624 g346 i0 90.7 0.310096153846154 43 3 31 1 93 221 41 82 WP_353763804.1 hypothetical protein, partial [Shigella sonnei] diamond 129 73.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella sonnei
31830146 31830146 PRJNA339266_S_NODE_8437_length_187_cov_3.886667_g8426_i0 PRJNA339266 8437 187 3.886667 7.26806729 Methylobacteriaceae 119045 Bacteria Bacteria 46.2 0.00105   NR WP_245265532.1 408 g8426 i0 45 1.92513368983957 60 32 94.7 1 2 178 48 107 WP_245265532.1 IS3 family transposase [Methylorubrum extorquens] diamond 360 46.6 0.991416309012876 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum extorquens
32002936 32002936 PRJNA339266_S_NODE_16998_length_156_cov_3.941176_g16987_i0 PRJNA339266 16998 156 3.941176 6.14823456 Pseudomonadota bacterium 1977087 Bacteria Bacteria 41.6 0.0201   NR NBP02836.1 1977087 g16987 i0 48.5 2.63461538461538 33 17 63.5 0 154 56 110 142 NBP02836.1 hypothetical protein [Pseudomonadota bacterium] diamond 411 41.6 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
32129669 32129669 PRJNA339266_S_NODE_14738_length_162_cov_3.368000_g14727_i0 PRJNA339266 14738 162 3.368 5.45616 Aquipseudomonas alcaligenes 43263 Bacteria Bacteria 92.4 8.44e-22   NR WP_280053387.1 43263 g14727 i0 100 0.833333333333333 45 0 83.3 0 160 26 6 50 WP_280053387.1 DUF4124 domain-containing protein, partial [Aquipseudomonas alcaligenes] diamond 135 92.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Aquipseudomonas Aquipseudomonas alcaligenes
32256409 32256409 PRJNA339266_P_NODE_5778_length_182_cov_5.117241_g5748_i0 PRJNA339266 5778 182 5.117241 9.31337862 Pelomonas aquatica 431058 Bacteria Bacteria 110 1.6300000000000002e-27   NR WP_268147289.1 431058 g5748 i0 100 0.906593406593407 55 0 90.7 0 178 14 262 316 WP_268147289.1 glycosyltransferase family 2 protein [Pelomonas aquatica] diamond 165 110 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
32431605 32431605 PRJNA339266_P_NODE_7859_length_156_cov_5.092437_g7829_i0 PRJNA339266 7859 156 5.092437 7.94420172 Moraxellaceae 468 Bacteria Bacteria 59.7 1.16e-8   NR WP_062333555.1 34062 g7829 i0 96.3 3.63461538461538 27 1 51.9 0 72 152 358 384 WP_062333555.1 FMN-binding glutamate synthase family protein [Moraxella osloensis] diamond 567 59.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Faucicola Faucicola osloensis
32446093 32446093 PRJNA339266_P_NODE_4359_length_190_cov_1.718954_g4329_i0 PRJNA339266 4359 190 1.718954 3.2660126 Cognatilysobacter xinjiangensis 546892 Bacteria Bacteria 112 3.3600000000000003e-29   NR WP_229790651.1 546892 g4329 i0 85.5 2.17894736842105 69 2 96.3 1 188 6 92 160 WP_229790651.1 hypothetical protein [Cognatilysobacter xinjiangensis] diamond 414 112 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Cognatilysobacter Cognatilysobacter xinjiangensis
32446107 32446107 PRJNA339266_S_NODE_5639_length_208_cov_1.409357_g5628_i0 PRJNA339266 5639 208 1.409357 2.93146256 Escherichia coli 562 Bacteria Bacteria 58.2 2.47e-9   NR WP_235636041.1 562 g5628 i0 76.5 0.490384615384615 34 8 49 0 35 136 31 64 WP_235636041.1 hypothetical protein, partial [Escherichia coli] diamond 102 58.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
32572654 32572654 PRJNA339266_P_NODE_5999_length_179_cov_18.795775_g5969_i0 PRJNA339266 5999 179 18.795775 33.64443725 Sphingomonas sp. Ag1 1642949 Bacteria Bacteria 70.1 1.64e-13   NR WP_046407321.1 1642949 g5969 i0 50 3.35195530726257 100 2 87.2 1 157 2 1 100 WP_046407321.1 hypothetical protein, partial [Sphingomonas sp. Ag1] diamond 600 70.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. Ag1
32887103 32887103 PRJNA339266_P_NODE_5880_length_181_cov_2.854167_g5850_i0 PRJNA339266 5880 181 2.854167 5.16604227 Sphingomonas desiccabilis 429134 Bacteria Bacteria 83.6 3.17e-17   NR WP_129341345.1 429134 g5850 i0 100 0.712707182320442 43 0 71.3 0 181 53 293 335 WP_129341345.1 Ldh family oxidoreductase [Sphingomonas desiccabilis] diamond 129 83.6 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas desiccabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;