RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA339266" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA339266 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27264415 27264415 PRJNA339266_S_NODE_12123_length_171_cov_1.417910_g12112_i0 PRJNA339266 12123 171 1.41791 2.4246261 Acropora millepora 45264 Cnidaria other_Eukaryota 58.2 1.65e-8   NR XP_029191643.2 45264 g12112 i0 60.5 3.78947368421053 43 10 75.4 1 168 40 143 178 XP_029191643.2 ADP-ribosylation factor-like protein 3 [Acropora millepora] diamond 648 58.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
27643557 27643557 PRJNA339266_S_NODE_5444_length_210_cov_1.699422_g5433_i0 PRJNA339266 5444 210 1.699422 3.5687862 Paramuricea clavata 317549 Cnidaria other_Eukaryota 43.9 0.01   NR CAB4025004.1 317549 g5433 i0 43.2 0.628571428571429 44 25 62.9 0 207 76 597 640 CAB4025004.1 Transposon TX1 uncharacterized 149 kDa, partial [Paramuricea clavata] diamond 132 43.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;