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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA335774" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA335774 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4897449 4897449 PRJNA335774_P_NODE_24584_length_314_cov_1.327801_g24432_i0 PRJNA335774 24584 314 1.327801 4.16929514 Metazoa 33208 Nematoda Nematoda 176 5.439999999999999e-52   NR TMS34161.1 34508 g24432 i0 83.7 25.8248407643312 104 17 99.4 0 312 1 170 273 TMS34161.1 hypothetical protein L596_001801 [Steinernema carpocapsae] diamond 8109 177 0.994350282485876 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
6768514 6768514 PRJNA335774_P_NODE_6746_length_543_cov_1.729787_g6595_i0 PRJNA335774 6746 543 1.729787 9.39274341 Metazoa 33208 Nematoda Nematoda 267 2.59e-86   NR VDN29982.1 637853 g6595 i0 70.5 4.01657458563536 183 48 98.9 2 539 3 2 182 VDN29982.1 unnamed protein product [Gongylonema pulchrum] diamond 2181 268 0.996268656716418 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gongylonematidae Gongylonema Gongylonema pulchrum
8044111 8044111 PRJNA335774_P_NODE_48827_length_226_cov_2.013072_g48675_i0 PRJNA335774 48827 226 2.013072 4.54954272 Oesophagostomum dentatum 61180 Nematoda Nematoda 82.8 2.2e-16   NR KHJ90003.1 61180 g48675 i0 65.8 3.67699115044248 73 19 96.9 2 221 3 8 74 KHJ90003.1 putative chaperone protein DnaK [Oesophagostomum dentatum] diamond 831 82.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Oesophagostomum Oesophagostomum dentatum
9318738 9318738 PRJNA335774_P_NODE_45128_length_244_cov_1.350877_g44976_i0 PRJNA335774 45128 244 1.350877 3.29613988 Metazoa 33208 Nematoda Nematoda 152 5.63e-41   NR PAV87568.1 2018661 g44976 i0 88.8 10.8196721311475 80 9 98.4 0 242 3 162 241 PAV87568.1 hypothetical protein WR25_00292 [Diploscapter pachys] diamond 2640 152 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
23341921 23341921 PRJNA335774_P_NODE_13819_length_399_cov_1.297546_g13667_i0 PRJNA335774 13819 399 1.297546 5.17720854 Metazoa 33208 Nematoda Nematoda 234 2.23e-73   NR TKR93749.1 34508 g13667 i0 84.2 10 133 21 100 0 1 399 213 345 TKR93749.1 hypothetical protein L596_008151 [Steinernema carpocapsae] diamond 3990 235 0.995744680851064 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
26648547 26648547 PRJNA335774_P_NODE_17981_length_358_cov_1.080702_g17829_i0 PRJNA335774 17981 358 1.080702 3.86891316 Metazoa 33208 Nematoda Nematoda 51.2 1.55e-4   NR GMT16754.1 1538716 g17829 i0 39.7 2.66480446927374 58 35 48.6 0 289 116 1512 1569 GMT16754.1 hypothetical protein PFISCL1PPCAC_8051, partial [Pristionchus fissidentatus] diamond 954 51.6 0.992248062015504 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
26996853 26996853 PRJNA335774_P_NODE_34102_length_270_cov_1.172589_g33950_i0 PRJNA335774 34102 270 1.172589 3.1659903 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 132 1.15e-33   NR MCP9266268.1 6287 g33950 i0 77.3 404.088888888889 88 20 97.8 0 269 6 667 754 MCP9266268.1 Calcium-transporting ATPase [Dirofilaria immitis] diamond 109104 133 0.992481203007519 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
27218107 27218107 PRJNA335774_P_NODE_35502_length_264_cov_1.308901_g35350_i0 PRJNA335774 35502 264 1.308901 3.45549864 Opisthokonta 33154 Nematoda Nematoda 115 1.3100000000000002e-27   NR NP_500617.1 6239 g35350 i0 65.5 26.6136363636364 87 29 97.7 1 258 1 651 737 NP_500617.1 2-oxoglutarate dehydrogenase, mitochondrial [Caenorhabditis elegans] diamond 7026 116 0.991379310344828 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27502882 27502882 PRJNA335774_P_NODE_24583_length_314_cov_1.344398_g24431_i0 PRJNA335774 24583 314 1.344398 4.22140972 Metazoa 33208 Nematoda Nematoda 173 5e-52   NR NP_001337315.1 6239 g24431 i0 86.5 49.6815286624204 104 14 99.4 0 2 313 31 134 NP_001337315.1 14-3-3 domain-containing protein [Caenorhabditis elegans] diamond 15600 174 0.994252873563218 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27643535 27643535 PRJNA335774_P_NODE_47284_length_242_cov_0.911243_g47132_i0 PRJNA335774 47284 242 0.911243 2.20520806 Teladorsagia circumcincta 45464 Nematoda Nematoda 64.3 2.38e-10   NR PIO74998.1 45464 g47132 i0 50 1.71074380165289 66 29 79.3 3 192 1 108 171 PIO74998.1 triacylglycerol lipase [Teladorsagia circumcincta] diamond 414 64.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Teladorsagia Teladorsagia circumcincta
27787050 27787050 PRJNA335774_P_NODE_18604_length_353_cov_0.946429_g18452_i0 PRJNA335774 18604 353 0.946429 3.34089437 Nematoda 6231 Nematoda Nematoda 122 1.08e-29   NR KAJ1346776.1 148309 g18452 i0 48.7 7.85269121813031 115 58 97.7 1 353 9 365 478 KAJ1346776.1 tyrosine protein phosphatase 1, variant 2 [Parelaphostrongylus tenuis] diamond 2772 122 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
27895801 27895801 PRJNA335774_P_NODE_25105_length_311_cov_1.571429_g24953_i0 PRJNA335774 25105 311 1.571429 4.88714419 Heligmosomoides polygyrus 6339 Nematoda Nematoda 69.7 2.67e-11   NR VDP02362.1 6339 g24953 i0 54.4 0.54983922829582 57 25 55 1 268 98 67 122 VDP02362.1 unnamed protein product [Heligmosomoides polygyrus] diamond 171 69.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
28559116 28559116 PRJNA335774_P_NODE_22927_length_323_cov_1.536000_g22775_i0 PRJNA335774 22927 323 1.536 4.96128 Soboliphyme baturini 241478 Nematoda Nematoda 48.1 0.00113   NR VDP38554.1 241478 g22775 i0 27.9 0.798761609907121 86 61 79.9 1 59 316 90 174 VDP38554.1 unnamed protein product [Soboliphyme baturini] diamond 258 48.1 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
28842933 28842933 PRJNA335774_P_NODE_15028_length_385_cov_1.464744_g14876_i0 PRJNA335774 15028 385 1.464744 5.6392644 Toxocara canis 6265 Nematoda Nematoda 73.9 8.4e-13   NR VDM48439.1 6265 g14876 i0 50 2.18961038961039 68 34 53 0 2 205 145 212 VDM48439.1 unnamed protein product [Toxocara canis] diamond 843 73.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
29127536 29127536 PRJNA335774_P_NODE_48749_length_232_cov_2.150943_g48597_i0 PRJNA335774 48749 232 2.150943 4.99018776 Caenorhabditis briggsae 6238 Nematoda Nematoda 80.9 6.76e-16   NR XP_045093431.1 6238 g48597 i0 53.9 0.982758620689655 76 35 98.3 0 3 230 130 205 XP_045093431.1 Protein CBR-NSTP-4 [Caenorhabditis briggsae] diamond 228 80.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
29239354 29239354 PRJNA335774_P_NODE_30289_length_286_cov_1.164319_g30137_i0 PRJNA335774 30289 286 1.164319 3.32995234 Metazoa 33208 Nematoda Nematoda 66.6 2.59e-10   NR KHN85186.1 6265 g30137 i0 34.4 10.7307692307692 93 61 97.6 0 279 1 780 872 KHN85186.1 Conserved oligomeric Golgi complex subunit 2 [Toxocara canis] diamond 3069 67 0.994029850746269 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
29459990 29459990 PRJNA335774_P_NODE_41770_length_248_cov_0.880000_g41618_i0 PRJNA335774 41770 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 49.7 1.34e-4   NR TKR82091.1 34508 g41618 i0 36 2.6491935483871 50 32 60.5 0 194 45 143 192 TKR82091.1 hypothetical protein L596_015865 [Steinernema carpocapsae] diamond 657 50.1 0.992015968063872 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
30011600 30011600 PRJNA335774_P_NODE_46111_length_243_cov_1.064706_g45959_i0 PRJNA335774 46111 243 1.064706 2.58723558 Strongyloides ratti 34506 Nematoda Nematoda 57.8 1.86e-7   NR XP_024506133.1 34506 g45959 i0 73.5 1.97530864197531 34 9 42 0 242 141 850 883 XP_024506133.1 Brain tumor protein [Strongyloides ratti] diamond 480 57.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
30186595 30186595 PRJNA335774_P_NODE_40132_length_250_cov_0.870056_g39980_i0 PRJNA335774 40132 250 0.870056 2.17514 Metazoa 33208 Nematoda Nematoda 100 2.0299999999999998e-23   NR NP_001370011.1 6239 g39980 i0 62.5 3.876 80 30 96 0 242 3 5 84 NP_001370011.1 putative 3-hydroxyisobutyrate dehydrogenase, mitochondrial [Caenorhabditis elegans] diamond 969 100 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
30232589 30232589 PRJNA335774_P_NODE_14552_length_390_cov_2.116719_g14400_i0 PRJNA335774 14552 390 2.116719 8.2552041 Cylicocyclus nassatus 53992 Nematoda Nematoda 174 8.609999999999999e-48   NR CAJ0594467.1 53992 g14400 i0 62.1 2.86153846153846 124 46 95.4 1 11 382 82 204 CAJ0594467.1 unnamed protein product [Cylicocyclus nassatus] diamond 1116 174 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Cylicocyclus Cylicocyclus nassatus
30313617 30313617 PRJNA335774_P_NODE_46732_length_243_cov_0.894118_g46580_i0 PRJNA335774 46732 243 0.894118 2.17270674 Metazoa 33208 Nematoda Nematoda 110 1.53e-26   NR TKR73845.1 34508 g46580 i0 59.8 11.0987654320988 82 32 100 1 1 243 272 353 TKR73845.1 hypothetical protein L596_021103 [Steinernema carpocapsae] diamond 2697 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
30502695 30502695 PRJNA335774_P_NODE_4733_length_630_cov_1.421903_g4588_i0 PRJNA335774 4733 630 1.421903 8.9579889 Rhabditida 6236 Nematoda Nematoda 310 3.249999999999999e-101   NR VDD87863.1 51028 g4588 i0 70.3 15.9142857142857 209 61 99.5 1 2 628 2 209 VDD87863.1 unnamed protein product [Enterobius vermicularis] diamond 10026 313 0.990415335463259 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
31528495 31528495 PRJNA335774_P_NODE_30976_length_283_cov_1.328571_g30824_i0 PRJNA335774 30976 283 1.328571 3.75985593 Cooperia oncophora 27828 Nematoda Nematoda 50.4 1.2e-4   NR KAK6056226.1 27828 g30824 i0 34.7 0.763250883392226 72 46 75.3 1 52 264 680 751 KAK6056226.1 hypothetical protein COOONC_06270 [Cooperia oncophora] diamond 216 50.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora
31830138 31830138 PRJNA335774_P_NODE_45117_length_244_cov_1.350877_g44965_i0 PRJNA335774 45117 244 1.350877 3.29613988 Metazoa 33208 Nematoda Nematoda 142 3.47e-38   NR KRZ56744.1 6335 g44965 i0 77.5 27.4918032786885 80 18 98.4 0 3 242 407 486 KRZ56744.1 Propionyl-CoA carboxylase beta chain, mitochondrial, partial [Trichinella nativa] diamond 6708 142 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nativa
32635076 32635076 PRJNA335774_P_NODE_13820_length_399_cov_1.285276_g13668_i0 PRJNA335774 13820 399 1.285276 5.12825124 Strongyloides ratti 34506 Nematoda Nematoda 187 3.07e-53   NR XP_024510700.1 34506 g13668 i0 65.4 4 133 46 100 0 399 1 480 612 XP_024510700.1 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain and ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal domain and ATPase, F1 complex alpha/beta subunit, N-terminal domain and ATPase, V1 complex, subunit A family and V-type ATP synthase catalytic alpha chain family and ATPase, F1 complex beta subunit/V1 complex, C-terminal domain and P-loop containing nucleoside triphosphate hydrolase domain-containing protein [Strongyloides ratti] diamond 1596 187 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
32683921 32683921 PRJNA335774_P_NODE_39220_length_251_cov_0.865169_g39068_i0 PRJNA335774 39220 251 0.865169 2.17157419 Nematoda 6231 Nematoda Nematoda 50.8 3.29e-5   NR XP_002636353.1 6238 g39068 i0 43.5 1.41035856573705 46 25 55 1 139 2 23 67 XP_002636353.1 Protein CBG08650 [Caenorhabditis briggsae] diamond 354 50.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
32683925 32683925 PRJNA335774_P_NODE_47020_length_242_cov_0.970414_g46868_i0 PRJNA335774 47020 242 0.970414 2.34840188 Rhabditida 6236 Nematoda Nematoda 99 2.87e-23   NR NP_509939.1 6239 g46868 i0 67.5 50.6157024793388 80 20 99.2 2 241 2 93 166 NP_509939.1 14-3-3-like protein 2 [Caenorhabditis elegans] diamond 12249 99 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
32904369 32904369 PRJNA335774_P_NODE_43920_length_246_cov_0.890173_g43768_i0 PRJNA335774 43920 246 0.890173 2.18982558 Metazoa 33208 Nematoda Nematoda 130 1.55e-33   NR KAH7727416.1 70226 g43768 i0 82.7 14.8048780487805 81 14 98.8 0 244 2 52 132 KAH7727416.1 T-complex protein 1 subunit delta-like protein [Aphelenchoides avenae] diamond 3642 130 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;