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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA335774" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA335774 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22067301 22067301 PRJNA335774_P_NODE_5618_length_587_cov_1.844358_g5469_i0 PRJNA335774 5618 587 1.844358 10.82638146 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 187 3.87e-57   NR UKK01874.1 68886 g5469 i0 68.5 8.42248722316865 149 44 74.6 2 42 479 1 149 UKK01874.1 calmodulin [Theileria orientalis] diamond 4944 188 0.99468085106383 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
27011269 27011269 PRJNA335774_P_NODE_24682_length_314_cov_0.958506_g24530_i0 PRJNA335774 24682 314 0.958506 3.00970884 Cryptosporidium muris RN66 441375 SAR_Eukaryotes SAR_Eukaryotes 49.7 3.25e-4   NR XP_002140872.1 441375 g24530 i0 35.6 2.42675159235669 87 47 81.2 3 59 313 1302 1381 XP_002140872.1 endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] diamond 762 49.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
27123229 27123229 PRJNA335774_P_NODE_32942_length_275_cov_1.143564_g32790_i0 PRJNA335774 32942 275 1.143564 3.144801 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 84 1.71e-16   NR KAF7457131.1 83540 g32790 i0 52.1 2.61818181818182 73 35 79.6 0 38 256 134 206 KAF7457131.1 putative cell-cycle-associated protein kinase MAPK [Cryptosporidium felis] diamond 720 84 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
27787044 27787044 PRJNA335774_P_NODE_12564_length_416_cov_1.513120_g12412_i0 PRJNA335774 12564 416 1.51312 6.2945792 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 78.6 4.03e-14   NR KAF7455983.1 83540 g12412 i0 37.3 6.38942307692308 110 69 79.3 0 411 82 196 305 KAF7455983.1 TBC domain-containing protein [Cryptosporidium felis] diamond 2658 78.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
28481524 28481524 PRJNA335774_P_NODE_39526_length_251_cov_0.865169_g39374_i0 PRJNA335774 39526 251 0.865169 2.17157419 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 3.569999999999999e-23   NR XP_026192387.1 88456 g39374 i0 55.1 16.1593625498008 78 34 93.2 1 17 250 234 310 XP_026192387.1 importin subunit alpha-1a [Cyclospora cayetanensis] diamond 4056 103 0.990291262135922 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
29127510 29127510 PRJNA335774_P_NODE_24869_length_313_cov_0.962500_g24717_i0 PRJNA335774 24869 313 0.9625 3.012625 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.0183   NR XP_004831371.1 1537102 g24717 i0 29.8 0.805111821086262 84 58 79.6 1 255 7 216 299 XP_004831371.1 hypothetical protein BEWA_011230 [Theileria equi strain WA] diamond 252 44.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
29870779 29870779 PRJNA335774_P_NODE_1531_length_978_cov_1.667403_g1438_i0 PRJNA335774 1531 978 1.667403 16.30720134 Eimeriidae 5799 SAR_Eukaryotes SAR_Eukaryotes 61.6 2.55e-6   NR XP_013249226.1 5801 g1438 i0 54.5 0.806748466257669 44 20 13.5 0 22 153 533 576 XP_013249226.1 hypothetical protein, conserved [Eimeria acervulina] diamond 789 61.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30692134 30692134 PRJNA335774_P_NODE_32053_length_279_cov_0.912621_g31901_i0 PRJNA335774 32053 279 0.912621 2.54621259 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 117 3.5999999999999996e-31   NR 2RHD_A 5807 g31901 i0 56.2 54.6236559139785 89 39 95.7 0 1 267 37 125 2RHD_A Chain A, Small GTP binding protein rab1a [Cryptosporidium parvum] diamond 15240 118 0.991525423728814 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
31180133 31180133 PRJNA335774_P_NODE_21095_length_335_cov_1.000000_g20943_i0 PRJNA335774 21095 335 1 3.35 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.27e-7   NR CAL7858378.1 1344799 g20943 i0 52.3 0.394029850746269 44 21 39.4 0 203 334 895 938 CAL7858378.1 unnamed protein product [Sarcocystis calchasi] diamond 132 59.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31402059 31402059 PRJNA335774_P_NODE_45896_length_244_cov_0.859649_g45744_i0 PRJNA335774 45896 244 0.859649 2.09754356 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 56.6 4.99e-7   NR XP_029215613.1 94643 g45744 i0 43.3 0.737704918032787 60 33 73.8 1 7 186 623 681 XP_029215613.1 EGF family domain-containing protein [Besnoitia besnoiti] diamond 180 56.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
31528498 31528498 PRJNA335774_P_NODE_32596_length_276_cov_1.517241_g32444_i0 PRJNA335774 32596 276 1.517241 4.18758516 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0382   NR OEH78494.1 88456 g32444 i0 55.6 0.978260869565217 45 16 45.7 2 269 144 293 336 OEH78494.1 microneme protein [Cyclospora cayetanensis] diamond 270 43.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31591828 31591828 PRJNA335774_P_NODE_24896_length_313_cov_0.925000_g24744_i0 PRJNA335774 24896 313 0.925 2.89525 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 76.6 1.05e-13   NR XP_028870119.1 462227 g24744 i0 39.6 1.72523961661342 106 54 92 2 288 1 121 226 XP_028870119.1 Mitogen-activated protein kinase 7 [Babesia sp. Xinjiang] diamond 540 76.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
31988457 31988457 PRJNA335774_P_NODE_5298_length_603_cov_1.139623_g5152_i0 PRJNA335774 5298 603 1.139623 6.87192669 root 1 Root_unresolved Root_unresolved 114 1.97e-25   NR OEH79845.1 88456 g5152 i0 39.4 3.86567164179104 170 99 84.1 3 527 21 582 748 OEH79845.1 ser thr phosphatase family protein [Cyclospora cayetanensis] diamond 2331 114 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;