contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA330616" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 389937 | 389937 | PRJNA330616_P_NODE_8921_length_278_cov_1.283843_g8512_i0 | PRJNA330616 | 8921 | 278 | 1.283843 | 3.56908354 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 144 | 6.88e-39 | NR | KAF1328421.1 | 82926 | g8512 | i0 | 76.1 | 6.91726618705036 | 92 | 22 | 99.3 | 0 | 277 | 2 | 44 | 135 | KAF1328421.1 Mitochondrial-processing peptidase subunit beta, partial [Globisporangium splendens] | diamond | 1923 | 145 | 0.993103448275862 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium splendens | ||
| 4217189 | 4217189 | PRJNA330616_P_NODE_9364_length_271_cov_2.509009_g8955_i0 | PRJNA330616 | 9364 | 271 | 2.509009 | 6.79941439 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 163 | 4.44e-49 | NR | KAF0727574.1 | 100861 | g8955 | i0 | 82.2 | 15.9409594095941 | 90 | 16 | 99.6 | 0 | 270 | 1 | 68 | 157 | KAF0727574.1 hypothetical protein Ae201684_014402 [Aphanomyces euteiches] | diamond | 4320 | 163 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 6767449 | 6767449 | PRJNA330616_P_NODE_3346_length_474_cov_1.729412_g2940_i0 | PRJNA330616 | 3346 | 474 | 1.729412 | 8.19741288 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 240 | 3.5e-78 | NR | KAG1694345.1 | 4784 | g2940 | i0 | 76.2 | 4.65822784810127 | 147 | 35 | 93 | 0 | 32 | 472 | 1 | 147 | KAG1694345.1 40S ribosomal protein S4 [Phytophthora capsici] | diamond | 2208 | 242 | 0.991735537190083 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora capsici | ||
| 16966839 | 16966839 | PRJNA330616_P_NODE_10054_length_261_cov_2.198113_g9645_i0 | PRJNA330616 | 10054 | 261 | 2.198113 | 5.73707493 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 125 | 2.8199999999999996e-32 | NR | OQS04692.1 | 74557 | g9645 | i0 | 84.7 | 5.8735632183908 | 72 | 11 | 82.8 | 0 | 45 | 260 | 1 | 72 | OQS04692.1 aspartyl/Asparaginyl beta-hydroxylase [Thraustotheca clavata] | diamond | 1533 | 126 | 0.992063492063492 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 23341638 | 23341638 | PRJNA330616_P_NODE_26039_length_167_cov_0.864407_g25630_i0 | PRJNA330616 | 26039 | 167 | 0.864407 | 1.44355969 | Aphanomyces cochlioides | 112091 | SAR_Eukaryotes | SAR_Eukaryotes | 109 | 5.76e-29 | NR | KAG9414218.1 | 112091 | g25630 | i0 | 100 | 1.86826347305389 | 52 | 0 | 93.4 | 0 | 1 | 156 | 87 | 138 | KAG9414218.1 60S ribosomal protein L18 [Aphanomyces cochlioides] | diamond | 312 | 109 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cochlioides | ||
| 23341750 | 23341750 | PRJNA330616_P_NODE_4179_length_419_cov_1.824324_g3771_i0 | PRJNA330616 | 4179 | 419 | 1.824324 | 7.64391756 | root | 1 | Root_unresolved | Root_unresolved | 224 | 9.17e-70 | NR | TMW60420.1 | 41045 | g3771 | i0 | 79.4 | 10.7326968973747 | 136 | 28 | 97.4 | 0 | 11 | 418 | 1 | 136 | TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] | diamond | 4497 | 226 | 0.991150442477876 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium oligandrum | ||
| 27485422 | 27485422 | PRJNA330616_P_NODE_18703_length_195_cov_1.047945_g18294_i0 | PRJNA330616 | 18703 | 195 | 1.047945 | 2.04349275 | Pythium oligandrum | 41045 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 5.79e-6 | NR | TMW63990.1 | 41045 | g18294 | i0 | 41.4 | 0.892307692307692 | 58 | 34 | 89.2 | 0 | 3 | 176 | 6650 | 6707 | TMW63990.1 hypothetical protein Poli38472_014695 [Pythium oligandrum] | diamond | 174 | 52.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium oligandrum | ||
| 27548515 | 27548515 | PRJNA330616_P_NODE_20104_length_188_cov_1.467626_g19695_i0 | PRJNA330616 | 20104 | 188 | 1.467626 | 2.75913688 | Thraustotheca clavata | 74557 | SAR_Eukaryotes | SAR_Eukaryotes | 99.8 | 1.47e-22 | NR | OQS07172.1 | 74557 | g19695 | i0 | 71 | 0.98936170212766 | 62 | 18 | 98.9 | 0 | 188 | 3 | 216 | 277 | OQS07172.1 ATP-binding Cassette (ABC) Superfamily [Thraustotheca clavata] | diamond | 186 | 99.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 28607776 | 28607776 | PRJNA330616_P_NODE_24627_length_170_cov_1.454545_g24218_i0 | PRJNA330616 | 24627 | 170 | 1.454545 | 2.4727265 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 43.5 | 0.0075 | NR | KAF0712453.1 | 120398 | g24218 | i0 | 76.9 | 6 | 26 | 6 | 45.9 | 0 | 93 | 170 | 7 | 32 | KAF0712453.1 hypothetical protein As57867_004815, partial [Aphanomyces stellatus] | diamond | 1020 | 43.9 | 0.990888382687927 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 29617811 | 29617811 | PRJNA330616_P_NODE_26770_length_166_cov_0.871795_g26361_i0 | PRJNA330616 | 26770 | 166 | 0.871795 | 1.4471797 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 41.2 | 0.0461 | NR | OWZ23328.1 | 4795 | g26361 | i0 | 51.9 | 1.91566265060241 | 54 | 23 | 92.2 | 1 | 3 | 155 | 2489 | 2542 | OWZ23328.1 Titin isoform N2B [Phytophthora megakarya] | diamond | 318 | 41.2 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora megakarya | ||
| 30439645 | 30439645 | PRJNA330616_P_NODE_9213_length_273_cov_2.808036_g8804_i0 | PRJNA330616 | 9213 | 273 | 2.808036 | 7.66593828 | Peronosporomycetes | 3418804 | SAR_Eukaryotes | SAR_Eukaryotes | 102 | 1.56e-25 | NR | KAG1703166.1 | 4784 | g8804 | i0 | 72.2 | 2.40659340659341 | 72 | 19 | 78 | 1 | 60 | 272 | 1 | 72 | KAG1703166.1 hypothetical protein DVH05_008077 [Phytophthora capsici] | diamond | 657 | 102 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora capsici | ||
| 30628813 | 30628813 | PRJNA330616_P_NODE_28113_length_165_cov_0.879310_g27704_i0 | PRJNA330616 | 28113 | 165 | 0.87931 | 1.4508615 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 55.5 | 4.11e-7 | NR | DAZ93209.1 | 4803 | g27704 | i0 | 49.1 | 8.81818181818182 | 53 | 26 | 96.4 | 1 | 6 | 164 | 69 | 120 | DAZ93209.1 TPA: hypothetical protein N0F65_001561 [Lagenidium giganteum] | diamond | 1455 | 55.5 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Lagenidium | Lagenidium giganteum | ||
| 30660616 | 30660616 | PRJNA330616_P_NODE_28813_length_164_cov_0.886957_g28404_i0 | PRJNA330616 | 28813 | 164 | 0.886957 | 1.45460948 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 77.8 | 1.56e-15 | NR | KAE8884689.1 | 53985 | g28404 | i0 | 64.8 | 2.94512195121951 | 54 | 19 | 98.8 | 0 | 1 | 162 | 154 | 207 | KAE8884689.1 40S ribosomal protein [Phytophthora fragariae] | diamond | 483 | 77.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora fragariae | ||
| 30896250 | 30896250 | PRJNA330616_P_NODE_30074_length_163_cov_0.894737_g29665_i0 | PRJNA330616 | 30074 | 163 | 0.894737 | 1.45842131 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 54.3 | 1.03e-6 | NR | KAH9122163.1 | 100861 | g29665 | i0 | 49.1 | 6.01840490797546 | 55 | 27 | 99.4 | 1 | 162 | 1 | 200 | 254 | KAH9122163.1 hypothetical protein AeMF1_006428 [Aphanomyces euteiches] | diamond | 981 | 54.3 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 32572589 | 32572589 | PRJNA330616_P_NODE_30099_length_163_cov_0.894737_g29690_i0 | PRJNA330616 | 30099 | 163 | 0.894737 | 1.45842131 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 75.1 | 4.94e-14 | NR | KAH9097788.1 | 100861 | g29690 | i0 | 70.2 | 6.31288343558282 | 57 | 14 | 99.4 | 1 | 1 | 162 | 369 | 425 | KAH9097788.1 hypothetical protein Ae201684P_001263 [Aphanomyces euteiches] | diamond | 1029 | 75.1 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;