RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA330616" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA330616 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13143457 13143457 PRJNA330616_P_NODE_8751_length_280_cov_2.645022_g8342_i0 PRJNA330616 8751 280 2.645022 7.4060616 Fungi 4751 Fungi Fungi 155 3.51e-45   NR EPZ33659.1 988480 g8342 i0 81.3 12.9321428571429 91 17 97.5 0 273 1 76 166 EPZ33659.1 60S ribosomal protein L8 [Rozella allomycis CSF55] diamond 3621 155 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
23341446 23341446 PRJNA330616_P_NODE_13179_length_228_cov_3.284916_g12770_i0 PRJNA330616 13179 228 3.284916 7.48960848 Rozella allomycis CSF55 988480 Fungi Fungi 81.6 1.16e-16   NR EPZ34692.1 988480 g12770 i0 66.2 4.13157894736842 65 21 84.2 1 211 20 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 81.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
26916389 26916389 PRJNA330616_P_NODE_14062_length_222_cov_1.179191_g13653_i0 PRJNA330616 14062 222 1.179191 2.61780402 Rozella allomycis CSF55 988480 Fungi Fungi 103 6.58e-24   NR EPZ31343.1 988480 g13653 i0 70.1 0.905405405405405 67 20 90.5 0 219 19 185 251 EPZ31343.1 DUF1900 domain-containing protein [Rozella allomycis CSF55] diamond 201 103 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32729840 32729840 PRJNA330616_P_NODE_32400_length_161_cov_0.910714_g31991_i0 PRJNA330616 32400 161 0.910714 1.46624954 Rozella allomycis CSF55 988480 Fungi Fungi 56.6 1.55e-7   NR EPZ35119.1 988480 g31991 i0 52.7 2.04968944099379 55 23 96.9 1 4 159 729 783 EPZ35119.1 Adenylyl cyclase class-3/4/guanylyl cyclase domain-containing protein, partial [Rozella allomycis CSF55] diamond 330 56.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;