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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA330616" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA330616 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11868231 11868231 PRJNA330616_P_NODE_17210_length_202_cov_1.333333_g16801_i0 PRJNA330616 17210 202 1.333333 2.69333266 Eukaryota 2759 Plants Plants 119 1.16e-29   NR XP_007510486.1 41875 g16801 i0 86.4 14.6138613861386 66 9 98 0 200 3 470 535 XP_007510486.1 S-adenosyl-L-homocysteine hydrolase [Bathycoccus prasinos] diamond 2952 120 0.991666666666667 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
13143056 13143056 PRJNA330616_P_NODE_11471_length_244_cov_1.569231_g11062_i0 PRJNA330616 11471 244 1.569231 3.82892364 Opisthokonta 33154 Plants Plants 131 1.07e-35   NR XP_002502307.1 296587 g11062 i0 77.8 24.8975409836066 81 18 99.6 0 243 1 50 130 XP_002502307.1 predicted protein [Micromonas commoda] diamond 6075 131 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
17646917 17646917 PRJNA330616_P_NODE_22374_length_179_cov_1.007692_g21965_i0 PRJNA330616 22374 179 1.007692 1.80376868 root 1 Root_unresolved Root_unresolved 95.9 1.46e-21   NR YP_009310466.1 36894 g21965 i0 77.2 52.4413407821229 57 13 95.5 0 6 176 9 65 YP_009310466.1 NADH dehydrogenase subunit 7 [Pyramimonas parkeae] diamond 9387 95.9 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Pyramimonas Pyramimonas parkeae
24615993 24615993 PRJNA330616_P_NODE_5960_length_343_cov_2.816327_g5551_i0 PRJNA330616 5960 343 2.816327 9.66000161 Eukaryota 2759 Plants Plants 181 5.949999999999999e-54   NR KAJ9532284.1 44745 g5551 i0 74.6 22.6268221574344 114 29 99.7 0 342 1 135 248 KAJ9532284.1 hypothetical protein QJQ45_010414 [Haematococcus lacustris] diamond 7761 182 0.994505494505495 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
26648540 26648540 PRJNA330616_P_NODE_19821_length_189_cov_1.614286_g19412_i0 PRJNA330616 19821 189 1.614286 3.05100054 Chlamydomonas 3052 Plants Plants 42.4 0.025   NR KAG2424799.1 51695 g19412 i0 46.9 1.55555555555556 49 26 77.8 0 175 29 151 199 KAG2424799.1 hypothetical protein HXX76_014222 [Chlamydomonas incerta] diamond 294 42.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
27895774 27895774 PRJNA330616_P_NODE_26885_length_166_cov_0.871795_g26476_i0 PRJNA330616 26885 166 0.871795 1.4471797 Ostreococcus tauri 70448 Plants Plants 61.2 3.61e-9   NR XP_003081198.1 70448 g26476 i0 52.7 2.00602409638554 55 26 99.4 0 165 1 25 79 XP_003081198.1 Thioredoxin, conserved site [Ostreococcus tauri] diamond 333 61.2 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus tauri
29018565 29018565 PRJNA330616_P_NODE_29068_length_164_cov_0.886957_g28659_i0 PRJNA330616 29068 164 0.886957 1.45460948 Chlorella 3071 Plants Plants 80.1 8.56e-16   NR KAI3428567.1 3077 g28659 i0 56.9 2.85365853658537 51 22 93.3 0 164 12 48 98 KAI3428567.1 hypothetical protein D9Q98_007389 [Chlorella vulgaris] diamond 468 80.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
29348369 29348369 PRJNA330616_P_NODE_20629_length_186_cov_1.218978_g20220_i0 PRJNA330616 20629 186 1.218978 2.26729908 Dunaliella salina 3046 Plants Plants 92.8 7.1e-23   NR KAF5840039.1 3046 g20220 i0 67.2 2.91935483870968 61 20 98.4 0 184 2 3 63 KAF5840039.1 ribosomal protein L37a component of cytosolic 80S ribosome and 60S large subunit [Dunaliella salina] diamond 543 92.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
29379830 29379830 PRJNA330616_P_NODE_14969_length_216_cov_0.970060_g14560_i0 PRJNA330616 14969 216 0.97006 2.0953296 Trebouxia sp. A1-2 2608996 Plants Plants 107 3.26e-25   NR KAA6412948.1 2608996 g14560 i0 69 0.986111111111111 71 22 98.6 0 3 215 457 527 KAA6412948.1 MAG: hypothetical protein FRX49_13747 [Trebouxia sp. A1-2] diamond 213 107 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
29853546 29853546 PRJNA330616_P_NODE_15511_length_212_cov_1.251534_g15102_i0 PRJNA330616 15511 212 1.251534 2.65325208 Koliella corcontica 155904 Plants Plants 47.8 3.64e-4   NR XAI66889.1 155904 g15102 i0 68.6 1.03301886792453 35 11 49.5 0 102 206 1 35 XAI66889.1 ATP synthase F0 subunit 6 [Koliella corcontica] diamond 219 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella corcontica
30755461 30755461 PRJNA330616_P_NODE_16234_length_208_cov_1.257862_g15825_i0 PRJNA330616 16234 208 1.257862 2.61635296 Trebouxiales 2507901 Plants Plants 110 4.16e-28   NR XP_005643653.1 574566 g15825 i0 80.6 5.78365384615385 67 13 96.6 0 203 3 69 135 XP_005643653.1 60S ribosomal protein L7 [Coccomyxa subellipsoidea C-169] diamond 1203 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
31211600 31211600 PRJNA330616_P_NODE_29875_length_163_cov_0.894737_g29466_i0 PRJNA330616 29875 163 0.894737 1.45842131 Astrephomene gubernaculifera 47775 Plants Plants 68.2 1.36e-11   NR GFR41818.1 47775 g29466 i0 57.4 5.96319018404908 54 23 99.4 0 2 163 336 389 GFR41818.1 hypothetical protein Agub_g2590 [Astrephomene gubernaculifera] diamond 972 68.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
31306890 31306890 PRJNA330616_P_NODE_31175_length_162_cov_0.902655_g30766_i0 PRJNA330616 31175 162 0.902655 1.4623011 Pleodorina starrii 330485 Plants Plants 49.7 4.3e-5   NR GLC50720.1 330485 g30766 i0 61 0.759259259259259 41 16 75.9 0 38 160 47 87 GLC50720.1 hypothetical protein PLESTB_000412000 [Pleodorina starrii] diamond 123 49.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
32399998 32399998 PRJNA330616_P_NODE_22939_length_176_cov_2.401575_g22530_i0 PRJNA330616 22939 176 2.401575 4.226772 Opisthokonta 33154 Plants Plants 92 6.52e-21   NR XP_022840602.1 70448 g22530 i0 77.6 7.90909090909091 58 13 98.9 0 2 175 157 214 XP_022840602.1 Ribosomal protein S3Ae [Ostreococcus tauri] diamond 1392 92 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus tauri
32446032 32446032 PRJNA330616_P_NODE_28119_length_165_cov_0.879310_g27710_i0 PRJNA330616 28119 165 0.87931 1.4508615 Chlamydomonas eustigma 1157962 Plants Plants 97.1 6.79e-22   NR GAX78472.1 1157962 g27710 i0 81.5 0.981818181818182 54 10 98.2 0 2 163 106 159 GAX78472.1 hypothetical protein CEUSTIGMA_g5911.t1 [Chlamydomonas eustigma] diamond 162 97.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;