contig_metadata
20 rows where analysis = "diamond", bioproject = "PRJNA330616" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15692470 | 15692470 | PRJNA330616_P_NODE_30993_length_162_cov_0.902655_g30584_i0 | PRJNA330616 | 30993 | 162 | 0.902655 | 1.4623011 | Bacillati | 1783272 | Bacteria | Bacteria | 93.6 | 4.72e-22 | NR | NLW29482.1 | 38403 | g30584 | i0 | 77.4 | 18.4814814814815 | 53 | 12 | 98.1 | 0 | 3 | 161 | 133 | 185 | NLW29482.1 superoxide dismutase [Erysipelothrix sp.] | diamond | 2994 | 94.4 | 0.991525423728813 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelothrix | Erysipelothrix sp. | ||
| 16967257 | 16967257 | PRJNA330616_P_NODE_8774_length_280_cov_1.450216_g8365_i0 | PRJNA330616 | 8774 | 280 | 1.450216 | 4.0606048 | FCB group | 1783270 | Bacteria | Bacteria | 154 | 3.9399999999999996e-42 | NR | WP_390302589.1 | 202260 | g8365 | i0 | 79.3 | 13.8535714285714 | 92 | 19 | 98.6 | 0 | 5 | 280 | 328 | 419 | WP_390302589.1 aldehyde dehydrogenase family protein [Virgibacillus sediminis] | diamond | 3879 | 154 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Virgibacillus | Virgibacillus sediminis | ||
| 17647000 | 17647000 | PRJNA330616_P_NODE_30334_length_163_cov_0.894737_g29925_i0 | PRJNA330616 | 30334 | 163 | 0.894737 | 1.45842131 | Bacillota | 1239 | Bacteria | Bacteria | 60.1 | 6.92e-9 | NR | MCQ8264833.1 | 1307 | g29925 | i0 | 55.6 | 7.26993865030675 | 54 | 24 | 99.4 | 0 | 163 | 2 | 3 | 56 | MCQ8264833.1 Cof-type HAD-IIB family hydrolase [Streptococcus suis] | diamond | 1185 | 60.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus suis | ||
| 26789893 | 26789893 | PRJNA330616_P_NODE_21461_length_182_cov_2.300752_g21052_i0 | PRJNA330616 | 21461 | 182 | 2.300752 | 4.18736864 | Carnobacterium maltaromaticum LMA28 | 1234679 | Bacteria | Bacteria | 43.9 | 0.00196 | NR | CCO09713.2 | 1234679 | g21052 | i0 | 53.5 | 1.36813186813187 | 43 | 18 | 67.6 | 1 | 3 | 125 | 72 | 114 | CCO09713.2 putative uncharacterized protein [Carnobacterium maltaromaticum LMA28] | diamond | 249 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium maltaromaticum | ||
| 26884946 | 26884946 | PRJNA330616_P_NODE_29661_length_163_cov_1.333333_g29252_i0 | PRJNA330616 | 29661 | 163 | 1.333333 | 2.17333279 | Solibacillus | 648800 | Bacteria | Bacteria | 61.2 | 3.78e-9 | NR | WP_051032377.1 | 648800 | g29252 | i0 | 48.1 | 1.98773006134969 | 54 | 28 | 99.4 | 0 | 1 | 162 | 264 | 317 | WP_051032377.1 MULTISPECIES: Ig-like domain-containing protein [Solibacillus] | diamond | 324 | 61.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Solibacillus | |||
| 27295874 | 27295874 | PRJNA330616_P_NODE_25683_length_167_cov_0.864407_g25274_i0 | PRJNA330616 | 25683 | 167 | 0.864407 | 1.44355969 | Bacillaceae | 186817 | Bacteria | Bacteria | 112 | 2.8700000000000003e-27 | NR | WP_098429757.1 | 186817 | g25274 | i0 | 94.5 | 0.988023952095808 | 55 | 3 | 98.8 | 0 | 1 | 165 | 241 | 295 | WP_098429757.1 MULTISPECIES: stage IV sporulation protein A [Bacillaceae] | diamond | 165 | 112 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | ||||
| 27439858 | 27439858 | PRJNA330616_P_NODE_1463_length_766_cov_4.354254_g1112_i0 | PRJNA330616 | 1463 | 766 | 4.354254 | 33.35358564 | Paenibacillus | 44249 | Bacteria | Bacteria | 126 | 8.869999999999999e-31 | NR | MEV2911048.1 | 1464 | g1112 | i0 | 44.5 | 5.51436031331593 | 155 | 75 | 60.3 | 4 | 766 | 305 | 151 | 295 | MEV2911048.1 ATP-binding protein [Paenibacillus larvae] | diamond | 4224 | 127 | 0.992125984251969 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus larvae | ||
| 27516981 | 27516981 | PRJNA330616_P_NODE_27223_length_166_cov_0.871795_g26814_i0 | PRJNA330616 | 27223 | 166 | 0.871795 | 1.4471797 | [Clostridium] innocuum | 1522 | Bacteria | Bacteria | 52 | 2.31e-6 | NR | WP_156113313.1 | 1522 | g26814 | i0 | 48.1 | 0.939759036144578 | 52 | 25 | 94 | 2 | 1 | 156 | 79 | 128 | WP_156113313.1 hypothetical protein, partial [[Clostridium] innocuum] | diamond | 156 | 52 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | [Clostridium] innocuum | ||
| 28291893 | 28291893 | PRJNA330616_P_NODE_24126_length_172_cov_1.406504_g23717_i0 | PRJNA330616 | 24126 | 172 | 1.406504 | 2.41918688 | Bacteria | 2 | Bacteria | Bacteria | 119 | 1.38e-29 | NR | WP_088001897.1 | 1516104 | g23717 | i0 | 100 | 1.98837209302326 | 57 | 0 | 99.4 | 0 | 1 | 171 | 568 | 624 | WP_088001897.1 TOMM precursor leader peptide-binding protein [Gottfriedia solisilvae] | diamond | 342 | 119 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Gottfriedia | Gottfriedia solisilvae | ||
| 28607777 | 28607777 | PRJNA330616_P_NODE_31547_length_162_cov_0.902655_g31138_i0 | PRJNA330616 | 31547 | 162 | 0.902655 | 1.4623011 | Gottfriedia | 2837503 | Bacteria | Bacteria | 102 | 1.07e-25 | NR | WP_025671591.1 | 186817 | g31138 | i0 | 88.9 | 2 | 54 | 6 | 100 | 0 | 1 | 162 | 119 | 172 | WP_025671591.1 MULTISPECIES: GNAT family N-acetyltransferase [Bacillaceae] | diamond | 324 | 103 | 0.990291262135922 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | ||||
| 29207881 | 29207881 | PRJNA330616_P_NODE_25729_length_167_cov_0.864407_g25320_i0 | PRJNA330616 | 25729 | 167 | 0.864407 | 1.44355969 | Anaerococcus | 165779 | Bacteria | Bacteria | 103 | 3.16e-24 | NR | WP_015777408.1 | 33034 | g25320 | i0 | 94.5 | 1.97604790419162 | 55 | 3 | 98.8 | 0 | 167 | 3 | 140 | 194 | WP_015777408.1 ClC family H(+)/Cl(-) exchange transporter [Anaerococcus prevotii] | diamond | 330 | 103 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus prevotii | ||
| 29712497 | 29712497 | PRJNA330616_P_NODE_30910_length_162_cov_0.902655_g30501_i0 | PRJNA330616 | 30910 | 162 | 0.902655 | 1.4623011 | Bacillaceae | 186817 | Bacteria | Bacteria | 83.2 | 1.27e-18 | NR | WP_088041702.1 | 1978338 | g30501 | i0 | 86.7 | 1.64814814814815 | 45 | 6 | 83.3 | 0 | 2 | 136 | 24 | 68 | WP_088041702.1 divergent PAP2 family protein [Bacillus sp. EAC] | diamond | 267 | 84 | 0.990476190476191 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. EAC | ||
| 30060159 | 30060159 | PRJNA330616_P_NODE_32031_length_161_cov_0.910714_g31622_i0 | PRJNA330616 | 32031 | 161 | 0.910714 | 1.46624954 | FCB group | 1783270 | Bacteria | Bacteria | 87.4 | 5.42e-19 | NR | WP_093134536.1 | 237682 | g31622 | i0 | 71.2 | 16.472049689441 | 52 | 15 | 96.9 | 0 | 160 | 5 | 64 | 115 | WP_093134536.1 TIGR01777 family oxidoreductase [Salinibacillus kushneri] | diamond | 2652 | 88.2 | 0.99092970521542 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Salinibacillus | Salinibacillus kushneri | ||
| 30200749 | 30200749 | PRJNA330616_P_NODE_32292_length_161_cov_0.910714_g31883_i0 | PRJNA330616 | 32292 | 161 | 0.910714 | 1.46624954 | Bacillus sp. AFS | 2033505 | Bacteria | Bacteria | 72.4 | 4.17e-13 | NR | WP_176547352.1 | 2033505 | g31883 | i0 | 56.6 | 1.97515527950311 | 53 | 23 | 98.8 | 0 | 161 | 3 | 239 | 291 | WP_176547352.1 recombinase family protein [Bacillus sp. AFS053548] | diamond | 318 | 72.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. AFS053548 | ||
| 30737991 | 30737991 | PRJNA330616_P_NODE_28754_length_164_cov_0.886957_g28345_i0 | PRJNA330616 | 28754 | 164 | 0.886957 | 1.45460948 | Gottfriedia solisilvae | 1516104 | Bacteria | Bacteria | 70.9 | 1.53e-12 | NR | WP_088001897.1 | 1516104 | g28345 | i0 | 82.9 | 0.75 | 41 | 7 | 75 | 0 | 42 | 164 | 1 | 41 | WP_088001897.1 TOMM precursor leader peptide-binding protein [Gottfriedia solisilvae] | diamond | 123 | 70.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Gottfriedia | Gottfriedia solisilvae | ||
| 31623191 | 31623191 | PRJNA330616_P_NODE_96_length_2336_cov_42.039353_g66_i0 | PRJNA330616 | 96 | 2336 | 42.039353 | 982.03928608 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 59.3 | 7.59e-6 | NR | MBQ4120586.1 | 2044939 | g66 | i0 | 31.6 | 0.585616438356164 | 114 | 70 | 14.6 | 2 | 586 | 245 | 48 | 153 | MBQ4120586.1 lytic transglycosylase domain-containing protein [Clostridia bacterium] | diamond | 1368 | 59.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 31907902 | 31907902 | PRJNA330616_P_NODE_25397_length_167_cov_1.669492_g24988_i0 | PRJNA330616 | 25397 | 167 | 1.669492 | 2.78805164 | Koleobacter methoxysyntrophicus | 2751313 | Bacteria | Bacteria | 41.2 | 0.046 | NR | WP_206709363.1 | 2751313 | g24988 | i0 | 46.3 | 0.736526946107784 | 41 | 20 | 70.1 | 1 | 157 | 41 | 164 | 204 | WP_206709363.1 regulatory iron-sulfur-containing complex subunit RicT [Koleobacter methoxysyntrophicus] | diamond | 123 | 41.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Koleobacterales | Koleobacteraceae | Koleobacter | Koleobacter methoxysyntrophicus | ||
| 32319572 | 32319572 | PRJNA330616_P_NODE_7119_length_312_cov_2.288973_g6710_i0 | PRJNA330616 | 7119 | 312 | 2.288973 | 7.14159576 | Staphylococcus pseudintermedius | 283734 | Bacteria | Bacteria | 119 | 1.1e-32 | NR | WP_222114562.1 | 283734 | g6710 | i0 | 97.5 | 1.55769230769231 | 81 | 2 | 77.9 | 0 | 244 | 2 | 1 | 81 | WP_222114562.1 hypothetical protein, partial [Staphylococcus pseudintermedius] | diamond | 486 | 119 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pseudintermedius | ||
| 32558327 | 32558327 | PRJNA330616_P_NODE_28859_length_164_cov_0.886957_g28450_i0 | PRJNA330616 | 28859 | 164 | 0.886957 | 1.45460948 | Bacillaceae | 186817 | Bacteria | Bacteria | 125 | 2.3699999999999998e-32 | NR | WP_087997854.1 | 1516104 | g28450 | i0 | 100 | 1.97560975609756 | 54 | 0 | 98.8 | 0 | 164 | 3 | 395 | 448 | WP_087997854.1 glucose-6-phosphate dehydrogenase [Gottfriedia solisilvae] | diamond | 324 | 125 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Gottfriedia | Gottfriedia solisilvae | ||
| 32603839 | 32603839 | PRJNA330616_P_NODE_16340_length_207_cov_1.329114_g15931_i0 | PRJNA330616 | 16340 | 207 | 1.329114 | 2.75126598 | Marinococcus halophilus | 1371 | Bacteria | Bacteria | 42.4 | 0.0256 | NR | WP_079475810.1 | 1371 | g15931 | i0 | 40.7 | 0.782608695652174 | 54 | 29 | 78.3 | 1 | 171 | 10 | 39 | 89 | WP_079475810.1 3-isopropylmalate dehydratase small subunit [Marinococcus halophilus] | diamond | 162 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Marinococcus | Marinococcus halophilus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;