RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA330616" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA330616 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20791382 20791382 PRJNA330616_P_NODE_9157_length_274_cov_1.995556_g8748_i0 PRJNA330616 9157 274 1.995556 5.46782344 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 135 2.04e-38   NR XP_029222174.1 94643 g8748 i0 73 2.94525547445255 89 24 97.4 0 274 8 63 151 XP_029222174.1 ribosomal protein RPL26 [Besnoitia besnoiti] diamond 807 136 0.992647058823529 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
28716877 28716877 PRJNA330616_P_NODE_19647_length_190_cov_1.446809_g19238_i0 PRJNA330616 19647 190 1.446809 2.7489371 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 60.1 6.35e-9   NR UVC54537.1 68886 g19238 i0 47.6 0.994736842105263 63 33 99.5 0 189 1 144 206 UVC54537.1 60S ribosomal L1/L10a protein [Theileria orientalis] diamond 189 60.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
28828654 28828654 PRJNA330616_P_NODE_28468_length_164_cov_1.773913_g28059_i0 PRJNA330616 28468 164 1.773913 2.90921732 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 57.4 9.4e-9   NR GFE54039.1 5869 g28059 i0 61.2 7.42682926829268 49 19 89.6 0 148 2 5 53 GFE54039.1 60S ribosomal protein L31 [Babesia ovis] diamond 1218 57.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
28906020 28906020 PRJNA330616_P_NODE_31908_length_161_cov_0.910714_g31499_i0 PRJNA330616 31908 161 0.910714 1.46624954 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 55.1 5.39e-7   NR XP_029221139.1 94643 g31499 i0 53.8 0.968944099378882 52 24 96.9 0 1 156 371 422 XP_029221139.1 hypothetical protein BESB_035880 [Besnoitia besnoiti] diamond 156 55.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
30597309 30597309 PRJNA330616_P_NODE_27373_length_165_cov_1.758621_g26964_i0 PRJNA330616 27373 165 1.758621 2.90172465 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.04e-5   NR XP_013229778.1 5802 g26964 i0 59.1 2.38181818181818 44 18 80 0 2 133 56 99 XP_013229778.1 ribosomal protein L41, putative [Eimeria tenella] diamond 393 49.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
31623180 31623180 PRJNA330616_P_NODE_25756_length_167_cov_0.864407_g25347_i0 PRJNA330616 25756 167 0.864407 1.44355969 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 59.3 1.88e-8   NR XP_067805073.1 323732 g25347 i0 59.1 2.67664670658683 44 18 79 0 132 1 436 479 XP_067805073.1 bifunctional Pumilio RNA-binding repeat/Armadillo-like helical/Pumilio [Babesia duncani] diamond 447 59.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
31861796 31861796 PRJNA330616_P_NODE_28057_length_165_cov_0.879310_g27648_i0 PRJNA330616 28057 165 0.87931 1.4508615 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.00728   NR SCO65374.1 5855 g27648 i0 56.4 7.89090909090909 39 13 63.6 2 111 7 1031 1069 SCO65374.1 cysteine repeat modular protein 2, putative [Plasmodium vivax] diamond 1302 43.9 0.990888382687927 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
31939426 31939426 PRJNA330616_P_NODE_9037_length_276_cov_1.559471_g8628_i0 PRJNA330616 9037 276 1.559471 4.30413996 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 92 6.01e-20   NR XP_067922602.1 483139 g8628 i0 51.7 4.72826086956522 87 42 94.6 0 262 2 108 194 XP_067922602.1 60s acidic ribosomal protein p0 [Cystoisospora suis] diamond 1305 92 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;