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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA330616" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 13 ✖

bioproject 1

  • PRJNA330616 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14418354 14418354 PRJNA330616_P_NODE_12452_length_234_cov_2.064865_g12043_i0 PRJNA330616 12452 234 2.064865 4.8317841 Dictyostelium 5782 Evosea other_Eukaryota 83.6 1.06e-16   NR CAA27855.1 44689 g12043 i0 58.8 2.61538461538462 68 26 87.2 1 206 3 49 114 CAA27855.1 unnamed protein product, partial [Dictyostelium discoideum] diamond 612 83.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27249946 27249946 PRJNA330616_P_NODE_16563_length_206_cov_1.261146_g16154_i0 PRJNA330616 16563 206 1.261146 2.59796076 Eumycetozoa 142796 Evosea other_Eukaryota 43.1 0.0172   NR KYR00721.1 361077 g16154 i0 36.4 3.91747572815534 66 42 96.1 0 205 8 758 823 KYR00721.1 alpha actinin [Tieghemostelium lacteum] diamond 807 43.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27516980 27516980 PRJNA330616_P_NODE_26763_length_166_cov_0.871795_g26354_i0 PRJNA330616 26763 166 0.871795 1.4471797 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.8 7.12e-5   NR XP_004351555.1 1257118 g26354 i0 45.3 0.957831325301205 53 29 95.8 0 3 161 67 119 XP_004351555.1 LSM domain containing protein [Acanthamoeba castellanii str. Neff] diamond 159 47.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27990721 27990721 PRJNA330616_P_NODE_28125_length_165_cov_0.879310_g27716_i0 PRJNA330616 28125 165 0.87931 1.4508615 Heterostelium album PN5 2086695 Evosea other_Eukaryota 68.6 1e-11   NR XP_020436862.1 670386 g27716 i0 64.2 4.81818181818182 53 19 96.4 0 6 164 397 449 XP_020436862.1 myosin II heavy chain [Heterostelium album PN500] diamond 795 68.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28039532 28039532 PRJNA330616_P_NODE_24905_length_169_cov_1.275000_g24496_i0 PRJNA330616 24905 169 1.275 2.15475 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.8 6.13e-8   NR KYQ92920.1 361077 g24496 i0 48.2 2.84023668639053 56 29 99.4 0 169 2 6 61 KYQ92920.1 cystathionine-beta-synthase domain-containing protein [Tieghemostelium lacteum] diamond 480 58.2 0.993127147766323 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28211404 28211404 PRJNA330616_P_NODE_12006_length_239_cov_1.047368_g11597_i0 PRJNA330616 12006 239 1.047368 2.50320952 Cavenderia fasciculata 261658 Evosea other_Eukaryota 58.2 1.06e-7   NR XP_004366990.1 261658 g11597 i0 45.5 1.97071129707113 55 30 69 0 237 73 233 287 XP_004366990.1 mitochondrial substrate carrier family protein [Cavenderia fasciculata] diamond 471 58.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28369414 28369414 PRJNA330616_P_NODE_30006_length_163_cov_0.894737_g29597_i0 PRJNA330616 30006 163 0.894737 1.45842131 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 77 9.44e-15   NR KYQ90204.1 361077 g29597 i0 54.9 0.938650306748466 51 23 93.9 0 7 159 64 114 KYQ90204.1 hypothetical protein DLAC_08803 [Tieghemostelium lacteum] diamond 153 77 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29064221 29064221 PRJNA330616_P_NODE_14728_length_217_cov_1.821429_g14319_i0 PRJNA330616 14728 217 1.821429 3.95250093 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 54.7 1.67e-6   NR KAH3767243.1 1580589 g14319 i0 44.4 0.995391705069124 72 40 99.5 0 216 1 376 447 KAH3767243.1 alpha-actinin, sarcomeric [Pelomyxa schiedti] diamond 216 54.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29253300 29253300 PRJNA330616_P_NODE_31909_length_161_cov_0.910714_g31500_i0 PRJNA330616 31909 161 0.910714 1.46624954 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 48.1 1.52e-4   NR KYR01534.1 361077 g31500 i0 38.6 3.09316770186335 57 30 96.9 1 156 1 394 450 KYR01534.1 hypothetical protein DLAC_01527 [Tieghemostelium lacteum] diamond 498 48.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30232573 30232573 PRJNA330616_P_NODE_26472_length_166_cov_1.307692_g26063_i0 PRJNA330616 26472 166 1.307692 2.17076872 Cavenderia deminutiva 361123 Evosea other_Eukaryota 82 1.8e-16   NR AOE43330.1 361123 g26063 i0 74.1 1.93373493975904 54 14 97.6 0 164 3 864 917 AOE43330.1 glutamate dehydrogenase 2 [Cavenderia deminutiva] diamond 321 82 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia deminutiva
31433378 31433378 PRJNA330616_P_NODE_29976_length_163_cov_0.894737_g29567_i0 PRJNA330616 29976 163 0.894737 1.45842131 Heterostelium album PN5 2086695 Evosea other_Eukaryota 57 1.13e-7   NR XP_020430554.1 670386 g29567 i0 44.4 1.98773006134969 54 30 99.4 0 1 162 97 150 XP_020430554.1 hypothetical protein PPL_09081 [Heterostelium album PN500] diamond 324 57 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
32034497 32034497 PRJNA330616_P_NODE_27698_length_165_cov_0.879310_g27289_i0 PRJNA330616 27698 165 0.87931 1.4508615 Polysphondylium violaceum 133409 Evosea other_Eukaryota 45.8 1.73e-4   NR KAF2071792.1 133409 g27289 i0 53.7 3.52727272727273 41 19 74.5 0 123 1 13 53 KAF2071792.1 hypothetical protein CYY_006899 [Polysphondylium violaceum] diamond 582 45.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32431581 32431581 PRJNA330616_P_NODE_26779_length_166_cov_0.871795_g26370_i0 PRJNA330616 26779 166 0.871795 1.4471797 Eumycetozoa 142796 Evosea other_Eukaryota 90.1 2.68e-19   NR KAF2075329.1 133409 g26370 i0 74.5 2.96385542168675 55 14 99.4 0 2 166 120 174 KAF2075329.1 hypothetical protein CYY_003358 [Polysphondylium violaceum] diamond 492 90.9 0.991199119911991 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;