RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA326068" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA326068 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27091941 27091941 PRJNA326068_P_NODE_15042_length_220_cov_1.623037_g14079_i0 PRJNA326068 15042 220 1.623037 3.5706814 Fungi 4751 Fungi Fungi 64.3 5.1e-11   NR KAJ1673721.1 68401 g14079 i0 50 7.51363636363636 70 26 83.2 1 183 1 1 70 KAJ1673721.1 40S ribosomal protein S22 [Spiromyces aspiralis] diamond 1653 64.7 0.993817619783617 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
28418562 28418562 PRJNA326068_P_NODE_16006_length_209_cov_2.738889_g15043_i0 PRJNA326068 16006 209 2.738889 5.72427801 Eukaryota 2759 Fungi Fungi 60.1 2.13e-9   NR XP_040744554.1 61395 g15043 i0 63 3.28708133971292 46 17 66 0 201 64 89 134 XP_040744554.1 uncharacterized protein DL89DRAFT_322311 [Linderina pennispora] diamond 687 60.5 0.993388429752066 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
28716870 28716870 PRJNA326068_P_NODE_7747_length_379_cov_2.665714_g6804_i0 PRJNA326068 7747 379 2.665714 10.10305606 Ramicandelaber brevisporus 304332 Fungi Fungi 98.6 1.0699999999999997e-23   NR KAI8872700.1 304332 g6804 i0 41 0.926121372031662 117 61 92.6 1 29 379 13 121 KAI8872700.1 ribosomal protein S1 [Ramicandelaber brevisporus] diamond 351 98.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota   Ramicandelaberales Ramicandelaberaceae Ramicandelaber Ramicandelaber brevisporus
30439640 30439640 PRJNA326068_P_NODE_7413_length_390_cov_2.623269_g6477_i0 PRJNA326068 7413 390 2.623269 10.2307491 Fungi 4751 Fungi Fungi 114 4.6199999999999995e-30   NR KAK9768031.1 34480 g6477 i0 58.7 9.63076923076923 104 42 80 1 46 357 1 103 KAK9768031.1 40S ribosomal protein S25 [Basidiobolus ranarum] diamond 3756 114 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;