RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA326068" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA326068 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28622215 28622215 PRJNA326068_P_NODE_7647_length_382_cov_7.623229_g6705_i0 PRJNA326068 7647 382 7.623229 29.12073478 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.0204   NR MEI6341235.1 2026799 g6705 i0 37.9 0.455497382198953 58 34 44 1 129 296 109 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 174 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29506025 29506025 PRJNA326068_P_NODE_6770_length_415_cov_6.196891_g5850_i0 PRJNA326068 6770 415 6.196891 25.71709765 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 45.1 0.0192   NR MEI6341235.1 2026799 g5850 i0 37.9 0.419277108433735 58 34 40.5 1 162 329 109 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 174 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;