RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA326068" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA326068 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16966765 16966765 PRJNA326068_P_NODE_13254_length_247_cov_2.197248_g12291_i0 PRJNA326068 13254 247 2.197248 5.42720256 Acrasis kona 1008807 Heterolobosea other_Eukaryota 137 8.2e-40   NR KAL0481688.1 1008807 g12291 i0 86.6 0.995951417004049 82 11 99.6 0 1 246 24 105 KAL0481688.1 ribosomal protein S25 [Acrasis kona] diamond 246 137 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30881727 30881727 PRJNA326068_P_NODE_8194_length_366_cov_2.836795_g7246_i0 PRJNA326068 8194 366 2.836795 10.3826697 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 123 1.03e-33   NR KAJ9469984.1 91374 g7246 i0 55.5 1.77868852459016 110 44 86.1 2 362 48 5 114 KAJ9469984.1 hypothetical protein DIPPA_35953 [Diplonema papillatum] diamond 651 123 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;