RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA316313" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA316313 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26821512 26821512 PRJNA316313_P_NODE_275461_length_187_cov_2.586667_g274075_i0 PRJNA316313 275461 187 2.586667 4.83706729 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 53.9 1.29e-6   NR MET0487968.1 2053607 g274075 i0 100 0.802139037433155 25 0 40.1 0 186 112 109 133 MET0487968.1 A/G-specific adenine glycosylase [Candidatus Rokuibacteriota bacterium] diamond 150 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
29284912 29284912 PRJNA316313_P_NODE_403429_length_151_cov_7.421053_g402043_i0 PRJNA316313 403429 151 7.421053 11.20579003 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 50.4 1.69e-5   NR MET0488031.1 2053607 g402043 i0 96 1.49006622516556 25 1 49.7 0 75 149 4 28 MET0488031.1 DUF6851 domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 225 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30453879 30453879 PRJNA316313_P_NODE_209633_length_187_cov_3.300000_g208247_i0 PRJNA316313 209633 187 3.3 6.171 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 52.8 4.96e-6   NR MET0485561.1 2053607 g208247 i0 96 0.401069518716578 25 1 40.1 0 3 77 317 341 MET0485561.1 rhodanese-like domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 75 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31008177 31008177 PRJNA316313_P_NODE_171694_length_187_cov_3.980000_g170308_i0 PRJNA316313 171694 187 3.98 7.4426 Bacteria 2 Bacteria Bacteria 60.8 7e-9   NR PYN08364.1 2053607 g170308 i0 96 2.00534759358289 25 1 40.1 0 2 76 32 56 PYN08364.1 MAG: hypothetical protein DME02_08120 [Candidatus Rokuibacteriota bacterium] diamond 375 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31971029 31971029 PRJNA316313_P_NODE_188638_length_187_cov_3.626667_g187252_i0 PRJNA316313 188638 187 3.626667 6.78186729 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 53.9 1.99e-6   NR MET0485300.1 2053607 g187252 i0 88 0.401069518716578 25 3 40.1 0 187 113 235 259 MET0485300.1 FAD-dependent monooxygenase [Candidatus Rokuibacteriota bacterium] diamond 75 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32540872 32540872 PRJNA316313_P_NODE_185659_length_187_cov_3.646667_g184273_i0 PRJNA316313 185659 187 3.646667 6.81926729 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 42.4 0.0206   NR PYM95990.1 2053607 g184273 i0 80 1.97326203208556 25 5 40.1 0 1 75 148 172 PYM95990.1 MAG: cation transporter [Candidatus Rokuibacteriota bacterium] diamond 369 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;