RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA316313" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA316313 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26725919 26725919 PRJNA316313_P_NODE_198561_length_187_cov_3.466667_g197175_i0 PRJNA316313 198561 187 3.466667 6.48266729 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 53.1 3.72e-6   NR HZE86875.1 2072417 g197175 i0 48.4 1.02673796791444 64 22 85 1 2 160 277 340 HZE86875.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 192 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27390722 27390722 PRJNA316313_P_NODE_153023_length_187_cov_4.560000_g151637_i0 PRJNA316313 153023 187 4.56 8.5272 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 89 1.19e-19   NR HEX2437360.1 2072417 g151637 i0 80.6 1.98930481283422 62 1 99.5 1 187 2 156 206 HEX2437360.1 SDR family oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 372 89 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28432611 28432611 PRJNA316313_P_NODE_421146_length_151_cov_4.842105_g419760_i0 PRJNA316313 421146 151 4.842105 7.31157855 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 76.6 2.62e-16   NR HEU4366719.1 2072417 g419760 i0 78 1.98675496688742 50 10 97.4 1 149 3 23 72 HEU4366719.1 response regulator [Candidatus Methylomirabilota bacterium] diamond 300 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30264428 30264428 PRJNA316313_P_NODE_380632_length_160_cov_3.040650_g379246_i0 PRJNA316313 380632 160 3.04065 4.86504 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 73.6 1.65e-13   NR MBI4382169.1 2072417 g379246 i0 78.8 0.975 52 9 93.8 1 159 10 544 595 MBI4382169.1 IPTL-CTERM sorting domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 156 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;