RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA315399" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315399 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4212349 4212349 PRJNA315399_S_NODE_28624_length_251_cov_7.182243_g28423_i0 PRJNA315399 28624 251 7.182243 18.02742993 Shenzhen dicistro-like virus 2789378 Viruses Viruses 97.1 3.32e-21   NR QPG92982.1 2789378 g28423 i0 54.9 1.9601593625498 82 37 98 0 4 249 819 900 QPG92982.1 polyprotein [Shenzhen dicistro-like virus] diamond 492 97.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
32192597 32192597 PRJNA315399_S_NODE_12758_length_322_cov_10.378947_g12557_i0 PRJNA315399 12758 322 10.378947 33.42020934 Panax cryptic virus 4 2809267 Viruses Viruses 75.5 3.33e-15   NR WAQ73893.1 2809267 g12557 i0 84.1 0.819875776397516 44 7 41 0 2 133 53 96 WAQ73893.1 coat protein, partial [Panax cryptic virus 4] diamond 264 75.5 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Panax cryptic virus 4
32287803 32287803 PRJNA315399_S_NODE_17819_length_290_cov_8.387352_g17618_i0 PRJNA315399 17819 290 8.387352 24.3233208 Shenzhen dicistro-like virus 2789378 Viruses Viruses 127 1.22e-31   NR QPG92982.1 2789378 g17618 i0 63.5 0.993103448275862 96 35 99.3 0 289 2 1114 1209 QPG92982.1 polyprotein [Shenzhen dicistro-like virus] diamond 288 127 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;