RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA315399" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315399 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27264212 27264212 PRJNA315399_S_NODE_19043_length_284_cov_5.433198_g18842_i0 PRJNA315399 19043 284 5.433198 15.43028232 Botourmiaviridae sp. 2808997 Viruses Viruses 54.7 3.83e-6   NR WAK77858.1 2808997 g18842 i0 42.9 0.961267605633803 91 51 95.1 1 2 271 608 698 WAK77858.1 MAG: RNA-dependent RNA polymerase, partial [Botourmiaviridae sp.] diamond 273 54.7 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
30769674 30769674 PRJNA315399_S_NODE_28414_length_252_cov_3.232558_g28213_i0 PRJNA315399 28414 252 3.232558 8.14604616 Plasmopara viticola lesion associated ourmia-like virus 45 2686515 Viruses Viruses 66.6 1.64e-10   NR YP_010800240.1 2686515 g28213 i0 51.5 0.80952380952381 68 32 79.8 1 13 213 449 516 YP_010800240.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated ourmia-like virus 45] diamond 204 66.6 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Epsilonscleroulivirus Epsilonscleroulivirus plasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;