RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA315399" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA315399 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27137136 27137136 PRJNA315399_P_NODE_109642_length_197_cov_13.018750_g109194_i0 PRJNA315399 109642 197 13.01875 25.6469375 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 50.8 1.22e-5   NR KAJ8047569.1 206669 g109194 i0 42.9 0.746192893401015 49 28 74.6 0 20 166 18 66 KAJ8047569.1 RNA-directed DNA polymerase from mobile element jockey [Holothuria leucospilota] diamond 147 50.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
27706625 27706625 PRJNA315399_P_NODE_468624_length_154_cov_3.914530_g468176_i0 PRJNA315399 468624 154 3.91453 6.0283762 Diadema antillarum 105358 Echinodermata other_Eukaryota 45.1 0.00172   NR XP_071500975.1 105358 g468176 i0 48.8 1.67532467532468 43 22 83.8 0 142 14 410 452 XP_071500975.1 uncharacterized protein [Diadema antillarum] diamond 258 45.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
28671012 28671012 PRJNA315399_P_NODE_24067_length_284_cov_8.797571_g23622_i0 PRJNA315399 24067 284 8.797571 24.98510164 Metazoa 33208 Echinodermata other_Eukaryota 44.7 0.0133   NR XP_041466934.1 7654 g23622 i0 43.6 0.73943661971831 39 22 41.2 0 4 120 1812 1850 XP_041466934.1 uncharacterized protein LOC121417330 [Lytechinus variegatus] diamond 210 44.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
29568998 29568998 PRJNA315399_P_NODE_103310_length_200_cov_3.509202_g102862_i0 PRJNA315399 103310 200 3.509202 7.018404 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 43.1 0.0149   NR KAJ8023755.1 206669 g102862 i0 64.3 0.855 28 10 42 0 114 31 131 158 KAJ8023755.1 hypothetical protein HOLleu_36289 [Holothuria leucospilota] diamond 171 43.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29586248 29586248 PRJNA315399_P_NODE_434850_length_158_cov_2.595041_g434402_i0 PRJNA315399 434850 158 2.595041 4.10016478 Metazoa 33208 Echinodermata other_Eukaryota 42.4 0.0162   NR XP_033630752.1 7604 g434402 i0 45.7 4.23417721518987 46 21 79.7 1 136 11 379 424 XP_033630752.1 uncharacterized protein LOC117292714 [Asterias rubens] diamond 669 42.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29695049 29695049 PRJNA315399_P_NODE_466770_length_154_cov_5.341880_g466322_i0 PRJNA315399 466770 154 5.34188 8.2264952 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 51.2 1.14e-5   NR KAJ8032438.1 206669 g466322 i0 44 3.56493506493507 50 28 97.4 0 5 154 645 694 KAJ8032438.1 RNA-directed DNA polymerase from mobile element jockey [Holothuria leucospilota] diamond 549 51.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29695066 29695066 PRJNA315399_S_NODE_113170_length_173_cov_1.852941_g112969_i0 PRJNA315399 113170 173 1.852941 3.20558793 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 49.3 6.6e-5   NR KAJ8018601.1 206669 g112969 i0 54.8 2.98265895953757 31 14 53.8 0 16 108 141 171 KAJ8018601.1 hypothetical protein HOLleu_43322 [Holothuria leucospilota] diamond 516 49.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30011352 30011352 PRJNA315399_P_NODE_346431_length_170_cov_5.781955_g345983_i0 PRJNA315399 346431 170 5.781955 9.8293235 Lytechinus pictus 7653 Echinodermata other_Eukaryota 51.2 1.41e-5   NR XP_063951714.1 7653 g345983 i0 45.2 1.48235294117647 42 23 74.1 0 162 37 293 334 XP_063951714.1 uncharacterized protein LOC135153223 [Lytechinus pictus] diamond 252 51.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
30186547 30186547 PRJNA315399_P_NODE_28872_length_274_cov_1.738397_g28427_i0 PRJNA315399 28872 274 1.738397 4.76320778 Metazoa 33208 Echinodermata other_Eukaryota 57.8 2.75e-7   NR KAJ8030849.1 206669 g28427 i0 39.8 6.38321167883212 83 43 83.2 1 30 257 607 689 KAJ8030849.1 Zinc finger MYM-type protein 1 [Holothuria leucospilota] diamond 1749 57.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30642974 30642974 PRJNA315399_P_NODE_332213_length_174_cov_10.321168_g331765_i0 PRJNA315399 332213 174 10.321168 17.95883232 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 44.3 0.00308   NR KAJ8027222.1 206669 g331765 i0 45.9 1.31034482758621 37 20 63.8 0 127 17 149 185 KAJ8027222.1 hypothetical protein HOLleu_32304 [Holothuria leucospilota] diamond 228 44.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32034323 32034323 PRJNA315399_P_NODE_413038_length_160_cov_4.089431_g412590_i0 PRJNA315399 413038 160 4.089431 6.5430896 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 44.7 0.00254   NR KAJ8025022.1 206669 g412590 i0 34.7 0.91875 49 32 91.9 0 10 156 1 49 KAJ8025022.1 putative DNA polymerase [Holothuria leucospilota] diamond 147 44.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;