RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA315399" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315399 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31211411 31211411 PRJNA315399_S_NODE_10355_length_345_cov_8.457792_g10154_i0 PRJNA315399 10355 345 8.457792 29.1793824 Malassezia restricta virus MrV4 76775 Viruses Viruses 197 7.379999999999998e-56   NR QJA42332.1 2727863 g10154 i0 83 1.94782608695652 112 19 97.4 0 8 343 792 903 QJA42332.1 polyprotein [Malassezia restricta virus MrV40L] diamond 672 197 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
32319422 32319422 PRJNA315399_S_NODE_24159_length_264_cov_8.656388_g23958_i0 PRJNA315399 24159 264 8.656388 22.85286432 Geotrichum candidum totivirus 3b 2971329 Viruses Viruses 160 2.0599999999999996e-43   NR UUT40381.1 2971329 g23958 i0 97.5 0.920454545454545 81 2 92 0 22 264 46 126 UUT40381.1 RNA-dependent RNA polymerase [Geotrichum candidum totivirus 3b] diamond 243 160 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Geotrichum candidum totivirus 3b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;