RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA315399" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA315399 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10589628 10589628 PRJNA315399_S_NODE_96449_length_180_cov_3.657343_g96248_i0 PRJNA315399 96449 180 3.657343 6.5832174 Bacteria 2 Bacteria Bacteria 99 2.02e-22   NR PKO16528.1 2013722 g96248 i0 76.4 2.75 55 13 91.7 0 179 15 188 242 PKO16528.1 MAG: insulinase family protein [candidate division BRC1 bacterium HGW-BRC1-1] diamond 495 100 0.99 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         candidate division BRC1 bacterium HGW-BRC1-1
19509640 19509640 PRJNA315399_P_NODE_501156_length_151_cov_3.289474_g500708_i0 PRJNA315399 501156 151 3.289474 4.96710574 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 62.4 1.24e-9   NR MCX7717555.1 2315423 g500708 i0 54.5 1.09271523178808 55 19 97.4 1 147 1 306 360 MCX7717555.1 glycosyltransferase [Candidatus Sumerlaeaceae bacterium] diamond 165 62.4 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium
27801080 27801080 PRJNA315399_P_NODE_407304_length_161_cov_1.580645_g406856_i0 PRJNA315399 407304 161 1.580645 2.54483845 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 45.8 2.29e-4   NR MFP4579089.1 2715255 g406856 i0 61.3 1.15527950310559 31 12 57.8 0 15 107 76 106 MFP4579089.1 thioredoxin [Candidatus Sumerlaeia bacterium] diamond 186 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
29712466 29712466 PRJNA315399_S_NODE_79670_length_189_cov_6.276316_g79469_i0 PRJNA315399 79670 189 6.276316 11.86223724 Candidatus Sumerlaea 2315418 Bacteria Bacteria 79.3 2.26e-15   NR MCX7018788.1 2107588 g79469 i0 64.9 2.71428571428571 57 20 90.5 0 17 187 170 226 MCX7018788.1 TIGR03663 family protein [Candidatus Sumerlaeota bacterium] diamond 513 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31085555 31085555 PRJNA315399_S_NODE_154615_length_159_cov_15.344262_g154414_i0 PRJNA315399 154615 159 15.344262 24.39737658 Candidatus Sumerlaeales bacterium 2925322 Bacteria Bacteria 92 4e-21   NR MDD4279862.1 2925322 g154414 i0 83 1.75471698113208 47 8 88.7 0 141 1 44 90 MDD4279862.1 site-specific DNA-methyltransferase [Candidatus Sumerlaeales bacterium] diamond 279 92 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales     Candidatus Sumerlaeales bacterium
31338350 31338350 PRJNA315399_S_NODE_95116_length_181_cov_1.923611_g94915_i0 PRJNA315399 95116 181 1.923611 3.48173591 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 61.2 3.84e-10   NR MBM3335638.1 2107588 g94915 i0 78.4 0.613259668508287 37 8 61.3 0 54 164 1 37 MBM3335638.1 SHOCT domain-containing protein [Candidatus Sumerlaeota bacterium] diamond 111 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;