RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA315399" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA315399 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28179616 28179616 PRJNA315399_P_NODE_68406_length_219_cov_4.681319_g67958_i0 PRJNA315399 68406 219 4.681319 10.25208861 Inoviridae sp. 2219103 Viruses Viruses 119 5.21e-30   NR XOF03038.1 2219103 g67958 i0 90.6 0.876712328767123 64 6 87.7 0 10 201 110 173 XOF03038.1 MAG: hypothetical protein [Inoviridae sp.] diamond 192 119 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
28905886 28905886 PRJNA315399_S_NODE_34628_length_238_cov_2.865672_g34427_i0 PRJNA315399 34628 238 2.865672 6.82029936 Inoviridae sp. 2219103 Viruses Viruses 75.9 8.23e-16   NR AXH73441.1 2219103 g34427 i0 54.9 0.894957983193277 71 32 89.5 0 224 12 1 71 AXH73441.1 MAG: putative 3-hydroxybutyryl-CoA dehydrogenase [Inoviridae sp.] diamond 213 75.9 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;