contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA315314" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15683673 | 15683673 | PRJNA315314_S_NODE_6113_length_327_cov_2.268456_g5792_i0 | PRJNA315314 | 6113 | 327 | 2.268456 | 7.41785112 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 185 | 5.21e-54 | NR | MCG3126236.1 | 2026778 | g5792 | i0 | 82.4 | 18.8256880733945 | 108 | 19 | 99.1 | 0 | 325 | 2 | 188 | 295 | MCG3126236.1 Phenylacetaldehyde dehydrogenase [Phycisphaerae bacterium] | diamond | 6156 | 185 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 27042746 | 27042746 | PRJNA315314_S_NODE_9322_length_265_cov_4.644068_g9001_i0 | PRJNA315314 | 9322 | 265 | 4.644068 | 12.3067802 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 43.1 | 0.0368 | NR | HZT83001.1 | 2052164 | g9001 | i0 | 40 | 0.679245283018868 | 60 | 29 | 60 | 1 | 23 | 181 | 703 | 762 | HZT83001.1 hypothetical protein [Gemmataceae bacterium] | diamond | 180 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 27074305 | 27074305 | PRJNA315314_S_NODE_10102_length_255_cov_2.022124_g9781_i0 | PRJNA315314 | 10102 | 255 | 2.022124 | 5.1564162 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 91.7 | 2.75e-19 | NR | MEY4566438.1 | 2026780 | g9781 | i0 | 55.6 | 0.952941176470588 | 81 | 36 | 95.3 | 0 | 13 | 255 | 224 | 304 | MEY4566438.1 hypothetical protein [Planctomycetota bacterium] | diamond | 243 | 91.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27611558 | 27611558 | PRJNA315314_S_NODE_31404_length_152_cov_2.243902_g31083_i0 | PRJNA315314 | 31404 | 152 | 2.243902 | 3.41073104 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 86.7 | 2.71e-18 | NR | MEN6384997.1 | 2052180 | g31083 | i0 | 76 | 0.986842105263158 | 50 | 12 | 98.7 | 0 | 1 | 150 | 206 | 255 | MEN6384997.1 DUF2828 family protein [Phycisphaerales bacterium] | diamond | 150 | 86.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 30232287 | 30232287 | PRJNA315314_S_NODE_10172_length_254_cov_1.986667_g9851_i0 | PRJNA315314 | 10172 | 254 | 1.986667 | 5.04613418 | Aquisphaera insulae | 2712864 | Bacteria | Bacteria | 53.5 | 6.47e-6 | NR | WP_165229365.1 | 2712864 | g9851 | i0 | 40.2 | 1.7244094488189 | 87 | 39 | 89.8 | 3 | 22 | 249 | 224 | 308 | WP_165229365.1 DUF3466 family protein [Aquisphaera insulae] | diamond | 438 | 53.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera insulae | |
| 30422277 | 30422277 | PRJNA315314_S_NODE_14193_length_217_cov_1.765957_g13872_i0 | PRJNA315314 | 14193 | 217 | 1.765957 | 3.83212669 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 70.5 | 4.47e-12 | NR | MBL8872133.1 | 2026779 | g13872 | i0 | 41.7 | 3.96774193548387 | 72 | 42 | 99.5 | 0 | 2 | 217 | 258 | 329 | MBL8872133.1 carboxypeptidase regulatory-like domain-containing protein [Planctomycetaceae bacterium] | diamond | 861 | 70.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 31054082 | 31054082 | PRJNA315314_S_NODE_18355_length_192_cov_8.742331_g18034_i0 | PRJNA315314 | 18355 | 192 | 8.742331 | 16.78527552 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42 | 0.037 | NR | MBM4008176.1 | 2026780 | g18034 | i0 | 63 | 0.421875 | 27 | 10 | 42.2 | 0 | 7 | 87 | 436 | 462 | MBM4008176.1 glycosyl transferase family 39 [Planctomycetota bacterium] | diamond | 81 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31085425 | 31085425 | PRJNA315314_S_NODE_20375_length_183_cov_3.279221_g20054_i0 | PRJNA315314 | 20375 | 183 | 3.279221 | 6.00097443 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42 | 0.0312 | NR | RMG34231.1 | 2026780 | g20054 | i0 | 43.6 | 0.901639344262295 | 55 | 31 | 90.2 | 0 | 169 | 5 | 22 | 76 | RMG34231.1 MAG: hypothetical protein D6725_14655 [Planctomycetota bacterium] | diamond | 165 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31116740 | 31116740 | PRJNA315314_S_NODE_29015_length_157_cov_2.281250_g28694_i0 | PRJNA315314 | 29015 | 157 | 2.28125 | 3.5815625 | Phycisphaera mikurensis | 547188 | Bacteria | Bacteria | 59.3 | 1.57e-8 | NR | WP_014436784.1 | 547188 | g28694 | i0 | 67.5 | 0.764331210191083 | 40 | 13 | 76.4 | 0 | 122 | 3 | 7 | 46 | WP_014436784.1 tyrosine--tRNA ligase [Phycisphaera mikurensis] | diamond | 120 | 59.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Phycisphaera mikurensis | |
| 31355941 | 31355941 | PRJNA315314_S_NODE_17896_length_195_cov_1.228916_g17575_i0 | PRJNA315314 | 17896 | 195 | 1.228916 | 2.3963862 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 63.5 | 8.88e-10 | NR | MBF0244012.1 | 2026780 | g17575 | i0 | 56.6 | 1.63076923076923 | 53 | 23 | 81.5 | 0 | 194 | 36 | 670 | 722 | MBF0244012.1 arginine--tRNA ligase [Planctomycetota bacterium] | diamond | 318 | 63.9 | 0.993740219092332 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31450816 | 31450816 | PRJNA315314_S_NODE_17256_length_198_cov_2.378698_g16935_i0 | PRJNA315314 | 17256 | 198 | 2.378698 | 4.70982204 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.1 | 2.3e-10 | NR | WP_148074969.1 | 1400387 | g16935 | i0 | 47.8 | 2 | 67 | 34 | 100 | 1 | 1 | 198 | 127 | 193 | WP_148074969.1 glycosyltransferase [Bythopirellula goksoeyrii] | diamond | 396 | 65.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Bythopirellula | Bythopirellula goksoeyrii | |
| 32620945 | 32620945 | PRJNA315314_S_NODE_6620_length_314_cov_2.185965_g6299_i0 | PRJNA315314 | 6620 | 314 | 2.185965 | 6.8639301 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 52.8 | 2.62e-5 | NR | HBO46329.1 | 2026779 | g6299 | i0 | 40 | 3.53503184713376 | 100 | 57 | 95.5 | 1 | 303 | 4 | 437 | 533 | HBO46329.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 1110 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;