contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA315314" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 380956 | 380956 | PRJNA315314_S_NODE_2981_length_458_cov_8.850816_g2663_i0 | PRJNA315314 | 2981 | 458 | 8.850816 | 40.53673728 | root | 1 | Root_unresolved | Root_unresolved | 196 | 6.3599999999999985e-56 | NR | WP_375767882.1 | 48 | g2663 | i0 | 72 | 17.3515283842795 | 132 | 37 | 86.5 | 0 | 398 | 3 | 542 | 673 | WP_375767882.1 LysM peptidoglycan-binding domain-containing protein [Archangium gephyra] | diamond | 7947 | 197 | 0.99492385786802 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 26631205 | 26631205 | PRJNA315314_S_NODE_22501_length_175_cov_3.568493_g22180_i0 | PRJNA315314 | 22501 | 175 | 3.568493 | 6.24486275 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 45.1 | 0.00176 | NR | MCX7959833.1 | 2026735 | g22180 | i0 | 37.8 | 0.771428571428571 | 45 | 28 | 77.1 | 0 | 35 | 169 | 42 | 86 | MCX7959833.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 135 | 45.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27200544 | 27200544 | PRJNA315314_S_NODE_25262_length_167_cov_1.000000_g24941_i0 | PRJNA315314 | 25262 | 167 | 1 | 1.67 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 53.9 | 1.35e-6 | NR | MBI5642334.1 | 2026735 | g24941 | i0 | 50 | 3.64670658682635 | 54 | 25 | 97 | 1 | 166 | 5 | 153 | 204 | MBI5642334.1 SDR family oxidoreductase [Deltaproteobacteria bacterium] | diamond | 609 | 53.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27485181 | 27485181 | PRJNA315314_S_NODE_25903_length_165_cov_1.727941_g25582_i0 | PRJNA315314 | 25903 | 165 | 1.727941 | 2.85110265 | Hyalangium minutum | 394096 | Bacteria | Bacteria | 43.1 | 0.0093 | NR | WP_052420032.1 | 394096 | g25582 | i0 | 43.4 | 1.92727272727273 | 53 | 30 | 96.4 | 0 | 163 | 5 | 279 | 331 | WP_052420032.1 zinc-binding alcohol dehydrogenase family protein [Hyalangium minutum] | diamond | 318 | 43.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Hyalangium | Hyalangium minutum | ||
| 27548266 | 27548266 | PRJNA315314_S_NODE_8024_length_285_cov_5.101562_g7703_i0 | PRJNA315314 | 8024 | 285 | 5.101562 | 14.5394517 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 57 | 6.18e-7 | NR | HLL00416.1 | 2484252 | g7703 | i0 | 44.1 | 1.78947368421053 | 93 | 44 | 97.9 | 2 | 280 | 2 | 1470 | 1554 | HLL00416.1 Ig-like domain-containing protein [Myxococcaceae bacterium] | diamond | 510 | 57 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 28053368 | 28053368 | PRJNA315314_S_NODE_19545_length_187_cov_1.506329_g19224_i0 | PRJNA315314 | 19545 | 187 | 1.506329 | 2.81683523 | Sandaracinaceae bacterium | 2510337 | Bacteria | Bacteria | 61.6 | 8.8e-10 | NR | MBK6580377.1 | 2510337 | g19224 | i0 | 66 | 0.850267379679144 | 53 | 15 | 80.2 | 2 | 37 | 186 | 6 | 58 | MBK6580377.1 tyrosine--tRNA ligase [Sandaracinaceae bacterium] | diamond | 159 | 61.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinaceae bacterium | ||||
| 28084979 | 28084979 | PRJNA315314_S_NODE_32545_length_150_cov_1.669421_g32224_i0 | PRJNA315314 | 32545 | 150 | 1.669421 | 2.5041315 | Hyalangium versicolor | 2861190 | Bacteria | Bacteria | 45.4 | 3.24e-4 | NR | WP_224367607.1 | 2861190 | g32224 | i0 | 61.8 | 1.36 | 34 | 13 | 68 | 0 | 103 | 2 | 1 | 34 | WP_224367607.1 GFA family protein [Hyalangium versicolor] | diamond | 204 | 45.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Hyalangium | Hyalangium versicolor | ||
| 28179551 | 28179551 | PRJNA315314_S_NODE_7266_length_299_cov_3.629630_g6945_i0 | PRJNA315314 | 7266 | 299 | 3.62963 | 10.8525937 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 50.8 | 9.62e-5 | NR | MBL8617982.1 | 2026735 | g6945 | i0 | 41.3 | 0.632107023411371 | 63 | 36 | 62.2 | 1 | 36 | 221 | 55 | 117 | MBL8617982.1 DUF2786 domain-containing protein [Deltaproteobacteria bacterium] | diamond | 189 | 50.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28242728 | 28242728 | PRJNA315314_S_NODE_17126_length_199_cov_1.341176_g16805_i0 | PRJNA315314 | 17126 | 199 | 1.341176 | 2.66894024 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 67 | 5.8e-11 | NR | MCK6572461.1 | 2818507 | g16805 | i0 | 54.5 | 0.829145728643216 | 55 | 25 | 82.9 | 0 | 34 | 198 | 150 | 204 | MCK6572461.1 hypothetical protein [Myxococcota bacterium] | diamond | 165 | 67 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 29839065 | 29839065 | PRJNA315314_S_NODE_12511_length_230_cov_2.179104_g12190_i0 | PRJNA315314 | 12511 | 230 | 2.179104 | 5.0119392 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 76.6 | 3.58e-14 | NR | HMV68259.1 | 2818507 | g12190 | i0 | 45.2 | 4.43478260869565 | 73 | 40 | 95.2 | 0 | 3 | 221 | 364 | 436 | HMV68259.1 M13 family metallopeptidase [Myxococcota bacterium] | diamond | 1020 | 76.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 30769540 | 30769540 | PRJNA315314_S_NODE_22654_length_175_cov_1.561644_g22333_i0 | PRJNA315314 | 22654 | 175 | 1.561644 | 2.732877 | Pyxidicoccus sp. 3LG | 3383247 | Bacteria | Bacteria | 77.4 | 8.64e-15 | NR | MFP2926531.1 | 3383247 | g22333 | i0 | 63.5 | 0.891428571428571 | 52 | 19 | 89.1 | 0 | 158 | 3 | 200 | 251 | MFP2926531.1 hypothetical protein [Pyxidicoccus sp. 3LG] | diamond | 156 | 77.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus sp. 3LG | ||
| 30832625 | 30832625 | PRJNA315314_S_NODE_4854_length_364_cov_5.426866_g4533_i0 | PRJNA315314 | 4854 | 364 | 5.426866 | 19.75379224 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 89.4 | 1.81e-20 | NR | MEQ1507343.1 | 2818507 | g4533 | i0 | 50 | 0.807692307692308 | 98 | 42 | 77.5 | 2 | 42 | 323 | 1 | 95 | MEQ1507343.1 hypothetical protein [Myxococcota bacterium] | diamond | 294 | 89.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31559891 | 31559891 | PRJNA315314_S_NODE_19956_length_185_cov_2.288462_g19635_i0 | PRJNA315314 | 19956 | 185 | 2.288462 | 4.2336547 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 57.4 | 1.16e-7 | NR | WP_095988966.1 | 43 | g19635 | i0 | 43.3 | 1.08648648648649 | 67 | 32 | 98.9 | 2 | 184 | 2 | 69 | 135 | WP_095988966.1 M13 family metallopeptidase [Cystobacter fuscus] | diamond | 201 | 57.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 31970869 | 31970869 | PRJNA315314_S_NODE_1038_length_757_cov_18.226648_g824_i0 | PRJNA315314 | 1038 | 757 | 18.226648 | 137.97572536 | Stigmatella erecta | 83460 | Bacteria | Bacteria | 52.4 | 7.14e-4 | NR | WP_143076215.1 | 83460 | g824 | i0 | 45.5 | 0.21796565389696201 | 55 | 29 | 21.4 | 1 | 756 | 595 | 160 | 214 | WP_143076215.1 hypothetical protein [Stigmatella erecta] | diamond | 165 | 52.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella erecta | ||
| 32509142 | 32509142 | PRJNA315314_S_NODE_9219_length_267_cov_1.823529_g8898_i0 | PRJNA315314 | 9219 | 267 | 1.823529 | 4.86882243 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 89 | 4.76e-19 | NR | MBW2716049.1 | 2026735 | g8898 | i0 | 53.7 | 1.8876404494382 | 82 | 37 | 92.1 | 1 | 20 | 265 | 157 | 237 | MBW2716049.1 OmpA family protein [Deltaproteobacteria bacterium] | diamond | 504 | 89 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;