RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA315314" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA315314 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14409594 14409594 PRJNA315314_S_NODE_15112_length_210_cov_5.685083_g14791_i0 PRJNA315314 15112 210 5.685083 11.9386743 Trypanosoma congolense IL3 5692 Euglenozoa other_Eukaryota 101 4.54e-25   NR CCC94700.1 1068625 g14791 i0 82.1 5.31428571428571 56 10 80 0 169 2 13 68 CCC94700.1 cyclophilin a [Trypanosoma congolense IL3000] diamond 1116 101 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
26902192 26902192 PRJNA315314_S_NODE_29081_length_157_cov_1.796875_g28760_i0 PRJNA315314 29081 157 1.796875 2.82109375 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 62.8 9.91e-10   NR KPI85420.1 5684 g28760 i0 58.7 5.19745222929936 46 19 87.9 0 5 142 656 701 KPI85420.1 putative Long chain fatty Acyl CoA synthetase [Leptomonas seymouri] diamond 816 62.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas seymouri
31970872 31970872 PRJNA315314_S_NODE_11678_length_238_cov_1.468900_g11357_i0 PRJNA315314 11678 238 1.4689 3.495982 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 90.9 1.04e-20   NR KAJ9464650.1 91374 g11357 i0 67.8 0.743697478991597 59 19 74.4 0 60 236 7 65 KAJ9464650.1 40S ribosomal protein S5 [Diplonema papillatum] diamond 177 90.9 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;