RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA315314" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA315314 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
381090 381090 PRJNA315314_S_NODE_7261_length_299_cov_4.759259_g6940_i0 PRJNA315314 7261 299 4.759259 14.23018441 Austropuccinia psidii 181123 Fungi Fungi 124 1.4299999999999996e-34   NR MBW0489473.1 1389203 g6940 i0 86.2 2.01672240802676 65 9 65.2 0 298 104 20 84 MBW0489473.1 hypothetical protein [Austropuccinia psidii MF-1] diamond 603 124 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Sphaerophragmiaceae Austropuccinia Austropuccinia psidii
1065348 1065348 PRJNA315314_S_NODE_26721_length_163_cov_1.014925_g26400_i0 PRJNA315314 26721 163 1.014925 1.65432775 Russulales 452342 Fungi Fungi 107 2.13e-25   NR XP_007307949.1 721885 g26400 i0 88.7 9.88343558282209 53 6 97.5 0 163 5 126 178 XP_007307949.1 isoleucine-tRNA ligase [Stereum hirsutum FP-91666 SS1] diamond 1611 107 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Stereaceae Stereum Stereum hirsutum
1655634 1655634 PRJNA315314_S_NODE_2362_length_514_cov_8.412371_g2063_i0 PRJNA315314 2362 514 8.412371 43.23958694 Trametes meyenii 526243 Fungi Fungi 239 7.29e-78   NR KAI0646293.1 526243 g2063 i0 82.5 16.6926070038911 154 23 88.1 3 509 57 23 175 KAI0646293.1 ribosomal protein S11-domain-containing protein [Trametes meyenii] diamond 8580 239 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes meyenii
4208231 4208231 PRJNA315314_S_NODE_5444_length_344_cov_9.155556_g5123_i0 PRJNA315314 5444 344 9.155556 31.49511264 Eukaryota 2759 Fungi Fungi 106 9.79e-28   NR KAF9787047.1 56493 g5123 i0 83.9 19.5174418604651 62 10 54.1 0 83 268 7 68 KAF9787047.1 40S ribosomal protein S28 [Thelephora terrestris] diamond 6714 106 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Thelephorales Thelephoraceae Thelephora Thelephora terrestris
8033958 8033958 PRJNA315314_S_NODE_14467_length_215_cov_2.059140_g14146_i0 PRJNA315314 14467 215 2.05914 4.427151 Marasmius 34448 Fungi Fungi 94.4 5.13e-21   NR KAJ8076880.1 585030 g14146 i0 60.9 1.92558139534884 69 27 96.3 0 211 5 223 291 KAJ8076880.1 Nuclear SAM-dependent mono-and asymmetric methyltransferase [Marasmius tenuissimus] diamond 414 94.7 0.996832101372756 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Marasmiaceae Marasmius Marasmius tenuissimus
9308725 9308725 PRJNA315314_S_NODE_15708_length_206_cov_4246.870056_g15387_i0 PRJNA315314 15708 206 4246.870056 8748.55231536 Fungi 4751 Fungi Fungi 113 4.19e-30   NR XP_021873467.1 4999 g15387 i0 82 4.4126213592233 61 11 88.8 0 183 1 30 90 XP_021873467.1 cyclophilin A [Kockovaella imperatae] diamond 909 114 0.991228070175439 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cuniculitremaceae Kockovaella Kockovaella imperatae
10584768 10584768 PRJNA315314_S_NODE_2889_length_465_cov_10.068807_g2573_i0 PRJNA315314 2889 465 10.068807 46.819952549999996 Opisthokonta 33154 Fungi Fungi 144 7.36e-40   NR XP_052947206.1 4972 g2573 i0 59.7 24.1935483870968 144 49 92.3 3 2 430 100 235 XP_052947206.1 structural constituent of ribosome [Dioszegia hungarica] diamond 11250 144 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
26631217 26631217 PRJNA315314_S_NODE_29581_length_156_cov_1.448819_g29260_i0 PRJNA315314 29581 156 1.448819 2.26015764 Dacryopinax primogenitus 1858805 Fungi Fungi 44.7 0.00137   NR XP_040632926.1 1858805 g29260 i0 55.6 1.78846153846154 45 20 86.5 0 148 14 12 56 XP_040632926.1 translationally-controlled tumor protein [Dacryopinax primogenitus] diamond 279 44.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Dacrymycetes Dacrymycetales Dacrymycetaceae Dacryopinax Dacryopinax primogenitus
26916144 26916144 PRJNA315314_S_NODE_32462_length_150_cov_2.008264_g32141_i0 PRJNA315314 32462 150 2.008264 3.012396 Rhizoctonia solani AG-1 IB 1108050 Fungi Fungi 46.2 7.89e-5   NR CEL54683.1 1108050 g32141 i0 51.3 0.78 39 19 78 0 5 121 38 76 CEL54683.1 hypothetical protein RSOLAG1IB_07217 [Rhizoctonia solani AG-1 IB] diamond 117 46.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani
27028608 27028608 PRJNA315314_S_NODE_32302_length_150_cov_3.264463_g31981_i0 PRJNA315314 32302 150 3.264463 4.8966945 Agaricomycetes 155619 Fungi Fungi 81.3 1.01e-16   NR KAI0309062.1 55340 g31981 i0 70.2 17.08 47 14 94 0 10 150 13 59 KAI0309062.1 40S ribosomal protein S2 [Amylostereum chailletii] diamond 2562 81.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Stereaceae Amylostereum Amylostereum chailletii
27439798 27439798 PRJNA315314_S_NODE_28423_length_158_cov_3.565891_g28102_i0 PRJNA315314 28423 158 3.565891 5.63410778 Agaricomycetes 155619 Fungi Fungi 100 9.68e-26   NR CAE7213997.1 456999 g28102 i0 80.8 11.7911392405063 52 10 98.7 0 157 2 30 81 CAE7213997.1 unnamed protein product [Rhizoctonia solani] diamond 1863 100 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani
27706525 27706525 PRJNA315314_S_NODE_10164_length_254_cov_2.488889_g9843_i0 PRJNA315314 10164 254 2.488889 6.32177806 Calocera viscosa TUFC12733 1330018 Fungi Fungi 78.6 1.05e-14   NR KZP01337.1 1330018 g9843 i0 47.4 3.70866141732283 76 38 87.4 1 224 3 656 731 KZP01337.1 actin cross-linking [Calocera viscosa TUFC12733] diamond 942 78.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Dacrymycetes Dacrymycetales Dacrymycetaceae Calocera Calocera viscosa
28481455 28481455 PRJNA315314_S_NODE_1706_length_596_cov_11.867725_g1439_i0 PRJNA315314 1706 596 11.867725 70.731641 Eukaryota 2759 Fungi Fungi 130 9.409999999999999e-35   NR KAK4333401.1 5286 g1439 i0 42.4 11.0738255033557 170 92 84.1 4 578 78 1 167 KAK4333401.1 Translationally-controlled tumor protein-like protein [Rhodotorula toruloides] diamond 6600 131 0.99236641221374 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides
31292465 31292465 PRJNA315314_S_NODE_1835_length_573_cov_12.397059_g1565_i0 PRJNA315314 1835 573 12.397059 71.03514807 Tremellales 5234 Fungi Fungi 106 1.1e-25   NR XP_052946076.1 4972 g1565 i0 43.4 4.24607329842932 136 75 71.2 1 567 160 6 139 XP_052946076.1 ribosomal protein L14-domain-containing protein, partial [Dioszegia hungarica] diamond 2433 106 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
31559911 31559911 PRJNA315314_S_NODE_3396_length_433_cov_10.428218_g3076_i0 PRJNA315314 3396 433 10.428218 45.15418394 Tilletia horrida 155126 Fungi Fungi 52.4 7.72e-5   NR KAK0536965.1 155126 g3076 i0 40.7 0.748267898383372 108 59 74.1 3 322 2 12 115 KAK0536965.1 60S ribosomal protein L6 [Tilletia horrida] diamond 324 52.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Tilletiales Tilletiaceae Tilletia Tilletia horrida

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;