RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA315314" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA315314 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27105778 27105778 PRJNA315314_S_NODE_23602_length_172_cov_1.601399_g23281_i0 PRJNA315314 23602 172 1.601399 2.75440628 Chlorovirus sp. 2809302 Viruses Viruses 84.3 3.15e-17   NR XOK35624.1 2809302 g23281 i0 64.9 0.994186046511628 57 20 99.4 0 172 2 106 162 XOK35624.1 Oxidoreductase [Chlorovirus sp.] diamond 171 84.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Chlorovirus sp.
29537409 29537409 PRJNA315314_S_NODE_27830_length_160_cov_1.557252_g27509_i0 PRJNA315314 27830 160 1.557252 2.4916032 Tetraselmis virus 1 2060617 Viruses Viruses 43.9 0.00483   NR YP_010783200.1 2060617 g27509 i0 34.3 1.25625 67 25 90 2 16 159 691 757 YP_010783200.1 glycine rich protein [Tetraselmis virus 1] diamond 201 43.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Allomimiviridae Oceanusvirus Oceanusvirus kaneohense
32572322 32572322 PRJNA315314_S_NODE_3219_length_445_cov_3.557692_g2899_i0 PRJNA315314 3219 445 3.557692 15.8317294 Edafosvirus sp. 2487765 Viruses Viruses 203 2.06e-60   NR AYV78014.1 2487765 g2899 i0 64.2 3.00674157303371 148 52 99.8 1 444 1 234 380 AYV78014.1 MAG: elongation factor 1 alpha long form [Edafosvirus sp.] diamond 1338 203 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;