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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA315314" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 30 ✖

bioproject 1

  • PRJNA315314 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
381082 381082 PRJNA315314_S_NODE_701_length_910_cov_11.082860_g542_i0 PRJNA315314 701 910 11.08286 100.854026 root 1 Root_unresolved Root_unresolved 181 1.4899999999999999e-53   NR ABD46602.1 5778 g542 i0 69.7 1.60879120879121 119 36 39.2 0 409 53 1 119 ABD46602.1 unknown, partial [Vermamoeba vermiformis] diamond 1464 182 0.994505494505495 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
1655546 1655546 PRJNA315314_S_NODE_18422_length_192_cov_2.815951_g18101_i0 PRJNA315314 18422 192 2.815951 5.40662592 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 2.3399999999999994e-23   NR PRP80538.1 1890364 g18101 i0 82 3.8125 61 11 95.3 0 185 3 539 599 PRP80538.1 ABC transporter E family member 2-like [Planoprotostelium fungivorum] diamond 732 103 0.990291262135922 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
1655769 1655769 PRJNA315314_S_NODE_342_length_1265_cov_13.385113_g246_i0 PRJNA315314 342 1265 13.385113 169.32167945 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 636 1.79e-220   NR XP_004337289.1 1257118 g246 i0 72.7 1.98260869565217 417 114 98.9 0 1265 15 423 839 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 2508 636 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4207964 4207964 PRJNA315314_S_NODE_18764_length_190_cov_5.198758_g18443_i0 PRJNA315314 18764 190 5.198758 9.8776402 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 1.05e-16   NR XP_004337223.1 1257118 g18443 i0 79.5 0.694736842105263 44 9 69.5 0 132 1 72 115 XP_004337223.1 nucleoside diphosphate kinase 1, putative [Acanthamoeba castellanii str. Neff] diamond 132 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19507105 19507105 PRJNA315314_S_NODE_956_length_789_cov_9.560526_g542_i1 PRJNA315314 956 789 9.560526 75.43255014 root 1 Root_unresolved Root_unresolved 181 2.8499999999999996e-54   NR ABD46602.1 5778 g542 i1 69.7 2.31939163498099 119 36 45.2 0 409 53 1 119 ABD46602.1 unknown, partial [Vermamoeba vermiformis] diamond 1830 182 0.994505494505495 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26680223 26680223 PRJNA315314_S_NODE_20481_length_183_cov_1.727273_g20160_i0 PRJNA315314 20481 183 1.727273 3.16090959 Eumycetozoa 142796 Evosea other_Eukaryota 49.7 5.65e-5   NR XP_003292987.1 5786 g20160 i0 53.7 5.65573770491803 41 16 62.3 1 180 67 244 284 XP_003292987.1 spermidine synthase [Dictyostelium purpureum] diamond 1035 50.1 0.992015968063872 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
26775535 26775535 PRJNA315314_S_NODE_31621_length_152_cov_1.154472_g31300_i0 PRJNA315314 31621 152 1.154472 1.75479744 Dictyosteliales 2058949 Evosea other_Eukaryota 55.8 1.27e-7   NR XP_636960.1 352472 g31300 i0 69.4 4.97368421052632 36 11 71.1 0 1 108 167 202 XP_636960.1 hypothetical protein DDB_G0288053 [Dictyostelium discoideum AX4] diamond 756 56.2 0.99288256227758 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
26807074 26807074 PRJNA315314_S_NODE_7621_length_292_cov_4.946768_g7300_i0 PRJNA315314 7621 292 4.946768 14.44456256 Dictyosteliales 2058949 Evosea other_Eukaryota 99 4.1200000000000003e-22   NR XP_643401.2 352472 g7300 i0 48.4 2.96917808219178 95 49 97.6 0 291 7 115 209 XP_643401.2 S-adenosylmethionine decarboxylase [Dictyostelium discoideum AX4] diamond 867 100 0.99 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27863900 27863900 PRJNA315314_S_NODE_15545_length_208_cov_1.497207_g15224_i0 PRJNA315314 15545 208 1.497207 3.11419056 Heterostelium album PN5 2086695 Evosea other_Eukaryota 56.6 1.63e-7   NR XP_020433113.1 670386 g15224 i0 53.4 3.40384615384615 58 22 83.7 1 2 175 165 217 XP_020433113.1 Rab GTPase [Heterostelium album PN500] diamond 708 56.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28102409 28102409 PRJNA315314_S_NODE_16645_length_201_cov_3.953488_g16324_i0 PRJNA315314 16645 201 3.953488 7.94651088 root 1 Root_unresolved Root_unresolved 49.3 1.53e-5   NR XP_004351526.1 1257118 g16324 i0 53.1 2.29850746268657 49 21 71.6 2 195 52 26 73 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 462 49.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28653423 28653423 PRJNA315314_S_NODE_20747_length_182_cov_1.771242_g20426_i0 PRJNA315314 20747 182 1.771242 3.22366044 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.1 2.36e-12   NR XP_004347761.1 1257118 g20426 i0 54.2 0.791208791208791 48 22 79.1 0 36 179 176 223 XP_004347761.1 iodothyronine deiodinase [Acanthamoeba castellanii str. Neff] diamond 144 70.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28671001 28671001 PRJNA315314_S_NODE_24887_length_168_cov_1.928058_g24566_i0 PRJNA315314 24887 168 1.928058 3.23913744 Acytosteliaceae 2058183 Evosea other_Eukaryota 98.6 2.99e-22   NR XP_020429784.1 670386 g24566 i0 72.7 8.82142857142857 55 15 98.2 0 168 4 934 988 XP_020429784.1 cobalamin-dependent methionine synthase [Heterostelium album PN500] diamond 1482 98.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28955276 28955276 PRJNA315314_S_NODE_19548_length_187_cov_1.455696_g19227_i0 PRJNA315314 19548 187 1.455696 2.72215152 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 1.12e-24   NR XP_003287730.1 5786 g19227 i0 75.8 34.8128342245989 62 15 99.5 0 2 187 160 221 XP_003287730.1 40S ribosomal protein S2 [Dictyostelium purpureum] diamond 6510 103 0.990291262135922 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28969225 28969225 PRJNA315314_S_NODE_28488_length_158_cov_2.627907_g28167_i0 PRJNA315314 28488 158 2.627907 4.15209306 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 63.2 6.38e-10   NR KYQ96683.1 361077 g28167 i0 56 1.93670886075949 50 22 94.9 0 8 157 1 50 KYQ96683.1 Mov34/MPN/PAD-1 family protein [Tieghemostelium lacteum] diamond 306 63.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29190264 29190264 PRJNA315314_S_NODE_22969_length_174_cov_1.579310_g22648_i0 PRJNA315314 22969 174 1.57931 2.7479994 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79 2.6e-15   NR XP_004341555.1 1257118 g22648 i0 69 1 58 18 100 0 174 1 39 96 XP_004341555.1 coatomer subunit gamma, putative [Acanthamoeba castellanii str. Neff] diamond 174 79 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29316424 29316424 PRJNA315314_S_NODE_24569_length_169_cov_1.464286_g24248_i0 PRJNA315314 24569 169 1.464286 2.47464334 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 92.8 4.95e-21   NR XP_012758962.1 1410327 g24248 i0 76.4 2.92899408284024 55 13 97.6 0 3 167 217 271 XP_012758962.1 hypothetical protein SAMD00019534_000750 [Acytostelium subglobosum LB1] diamond 495 92.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29442498 29442498 PRJNA315314_S_NODE_27050_length_162_cov_1.661654_g26729_i0 PRJNA315314 27050 162 1.661654 2.69187948 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 5.33e-12   NR XP_004358299.1 1257118 g26729 i0 55.8 0.962962962962963 52 23 96.3 0 162 7 175 226 XP_004358299.1 signal recognition particle 68 kDa protein [Acanthamoeba castellanii str. Neff] diamond 156 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29979525 29979525 PRJNA315314_S_NODE_12871_length_227_cov_2.065657_g12550_i0 PRJNA315314 12871 227 2.065657 4.68904139 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 47.8 5.09e-4   NR PRP88258.1 1890364 g12550 i0 34.9 1.62555066079295 63 37 81.9 2 3 188 326 385 PRP88258.1 LPXTG-motif cell wall anchor domain-containing protein [Planoprotostelium fungivorum] diamond 369 47.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29979528 29979528 PRJNA315314_S_NODE_15771_length_206_cov_3.802260_g15450_i0 PRJNA315314 15771 206 3.80226 7.8326556 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 71.2 1.18e-13   NR KAH3759508.1 1580589 g15450 i0 56.5 1.00485436893204 69 25 97.6 2 2 202 10 75 KAH3759508.1 hypothetical protein Pelo_8679 [Pelomyxa schiedti] diamond 207 71.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30218162 30218162 PRJNA315314_S_NODE_14812_length_212_cov_4.923497_g14491_i0 PRJNA315314 14812 212 4.923497 10.43781364 Acytosteliales 2058181 Evosea other_Eukaryota 91.3 1.06e-19   NR XP_004357207.1 261658 g14491 i0 69.8 3.55188679245283 63 18 89.2 1 22 210 78 139 XP_004357207.1 S-adenosylmethionine decarboxylase [Cavenderia fasciculata] diamond 753 91.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30769530 30769530 PRJNA315314_S_NODE_15874_length_206_cov_1.418079_g15553_i0 PRJNA315314 15874 206 1.418079 2.92124274 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 63.2 2.27e-10   NR KAH3764251.1 1580589 g15553 i0 48.5 0.990291262135922 68 33 97.6 2 203 3 80 146 KAH3764251.1 hypothetical protein Pelo_3898 [Pelomyxa schiedti] diamond 204 63.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31306594 31306594 PRJNA315314_S_NODE_11415_length_240_cov_3.127962_g11094_i0 PRJNA315314 11415 240 3.127962 7.5071088 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 76.6 2.83e-14   NR PRP79852.1 1890364 g11094 i0 52.9 0.875 70 33 87.5 0 2 211 79 148 PRP79852.1 hypothetical protein PROFUN_12464 [Planoprotostelium fungivorum] diamond 210 76.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31591550 31591550 PRJNA315314_S_NODE_8036_length_285_cov_4.039062_g7715_i0 PRJNA315314 8036 285 4.039062 11.5113267 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 50.4 1.16e-4   NR XP_004259638.1 370355 g7715 i0 42.6 1.75789473684211 54 29 55.8 2 280 122 334 386 XP_004259638.1 hypothetical protein EIN_508680 [Entamoeba invadens IP1] diamond 501 50.4 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
31893501 31893501 PRJNA315314_S_NODE_6477_length_317_cov_4.388889_g6156_i0 PRJNA315314 6477 317 4.388889 13.91277813 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 133 3.16e-35   NR XP_003290851.1 5786 g6156 i0 64.8 15.8044164037855 105 36 99.4 1 1 315 128 231 XP_003290851.1 uncharacterized protein DICPUDRAFT_49487 [Dictyostelium purpureum] diamond 5010 133 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32413981 32413981 PRJNA315314_S_NODE_11399_length_240_cov_3.734597_g11078_i0 PRJNA315314 11399 240 3.734597 8.9630328 Polysphondylium violaceum 133409 Evosea other_Eukaryota 70.1 7.92e-12   NR KAF2074889.1 133409 g11078 i0 50 2.0375 80 39 98.8 1 239 3 287 366 KAF2074889.1 hypothetical protein CYY_003808 [Polysphondylium violaceum] diamond 489 70.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32509123 32509123 PRJNA315314_S_NODE_28539_length_158_cov_2.271318_g28218_i0 PRJNA315314 28539 158 2.271318 3.58868244 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.9 9.87e-13   NR XP_004337914.1 1257118 g28218 i0 59.6 0.987341772151899 52 21 98.7 0 157 2 238 289 XP_004337914.1 COP9 signalosome complex subunit 3 (Signalosome subunit 3), putative [Acanthamoeba castellanii str. Neff] diamond 156 70.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32572320 32572320 PRJNA315314_S_NODE_30819_length_153_cov_2.846774_g30498_i0 PRJNA315314 30819 153 2.846774 4.35556422 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 49.3 5.42e-5   NR XP_004342569.1 1257118 g30498 i0 40.8 0.96078431372549 49 29 96.1 0 1 147 219 267 XP_004342569.1 fatty acid desaturase subfamily protein [Acanthamoeba castellanii str. Neff] diamond 147 49.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32603592 32603592 PRJNA315314_S_NODE_23000_length_174_cov_1.268966_g22679_i0 PRJNA315314 23000 174 1.268966 2.20800084 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 5.39e-12   NR XP_004340695.1 1257118 g22679 i0 54.9 0.879310344827586 51 23 87.9 0 153 1 69 119 XP_004340695.1 uncharacterized protein ACA1_392980 [Acanthamoeba castellanii str. Neff] diamond 153 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32697908 32697908 PRJNA315314_S_NODE_31540_length_152_cov_1.666667_g31219_i0 PRJNA315314 31540 152 1.666667 2.53333384 Polysphondylium violaceum 133409 Evosea other_Eukaryota 69.3 4.48e-12   NR KAF2073598.1 133409 g31219 i0 60 0.986842105263158 50 20 98.7 0 152 3 112 161 KAF2073598.1 hypothetical protein CYY_005087 [Polysphondylium violaceum] diamond 150 69.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32792249 32792249 PRJNA315314_S_NODE_30900_length_153_cov_2.225806_g30579_i0 PRJNA315314 30900 153 2.225806 3.40548318 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.7 3.28e-12   NR XP_004333431.1 1257118 g30579 i0 56.3 0.941176470588235 48 21 94.1 0 6 149 656 703 XP_004333431.1 cytochrome b5 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 144 69.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;