RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA314497" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA314497 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16958014 16958014 PRJNA314497_S_NODE_474_length_349_cov_8.743750_g451_i0 PRJNA314497 474 349 8.74375 30.5156875 Culicoides brevitarsis 469753 Arthropoda Arthropoda 187 1.84e-59   NR XP_063703218.1 469753 g451 i0 89.9 0.851002865329513 99 10 85.1 0 14 310 1 99 XP_063703218.1 ATP synthase subunit g, mitochondrial [Culicoides brevitarsis] diamond 297 187 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Ceratopogonidae Culicoides Culicoides brevitarsis
30105808 30105808 PRJNA314497_S_NODE_372_length_397_cov_6.013587_g349_i0 PRJNA314497 372 397 6.013587 23.87394039 Culicoides sonorensis 179676 Arthropoda Arthropoda 150 1.55e-44   NR AAU06505.1 179676 g349 i0 84.4 0.581863979848867 77 12 58.2 0 352 122 1 77 AAU06505.1 unknown salivary protein [Culicoides sonorensis] diamond 231 150 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Ceratopogonidae Culicoides Culicoides sonorensis
31306593 31306593 PRJNA314497_S_NODE_455_length_356_cov_6.348624_g432_i0 PRJNA314497 455 356 6.348624 22.60110144 Thrips palmi 161013 Arthropoda Arthropoda 48.1 0.00175   NR XP_034240145.1 161013 g432 i0 33.3 0.758426966292135 90 55 74.2 2 83 346 805 891 XP_034240145.1 uncharacterized protein LOC117644643 [Thrips palmi] diamond 270 48.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Thysanoptera Thripidae Thrips Thrips palmi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;