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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA312899" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 26 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6757006 6757006 PRJNA312899_P_NODE_30006_length_337_cov_2.805556_g29564_i0 PRJNA312899 30006 337 2.805556 9.45472372 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 131 2.0199999999999997e-37   NR XP_008618752.1 1156394 g29564 i0 74.7 0.738872403560831 83 20 73 1 337 92 5 87 XP_008618752.1 hypothetical protein SDRG_14406 [Saprolegnia diclina VS20] diamond 249 131 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
6757843 6757843 PRJNA312899_P_NODE_7766_length_671_cov_7.372990_g7393_i0 PRJNA312899 7766 671 7.37299 49.4727629 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.8 9.15e-17   NR CCI48717.1 65357 g7393 i0 50 2.26229508196721 76 34 33.5 2 647 423 5 77 CCI48717.1 unnamed protein product [Albugo candida] diamond 1518 83.2 0.995192307692308 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
13134147 13134147 PRJNA312899_P_NODE_9291_length_620_cov_5.611208_g8896_i0 PRJNA312899 9291 620 5.611208 34.7894896 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 275 1.1799999999999997e-89   NR KAJ0411878.1 114742 g8896 i0 65.6 9.09193548387097 209 69 99.7 2 620 3 66 274 KAJ0411878.1 hypothetical protein ATCC90586_005973 [Pythium insidiosum] diamond 5637 277 0.992779783393502 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
13818557 13818557 PRJNA312899_P_NODE_9371_length_617_cov_74.239437_g8976_i0 PRJNA312899 9371 617 74.239437 458.05732629 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 147 5.62e-40   NR KAJ8578052.1 4785 g8976 i0 53.3 4.78930307941653 167 49 80.7 4 615 118 122 260 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 2955 147 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
24605021 24605021 PRJNA312899_P_NODE_13360_length_517_cov_3.715812_g12930_i0 PRJNA312899 13360 517 3.715812 19.21074804 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 102 1.18e-21   NR KAF1314525.1 82926 g12930 i0 37.5 0.835589941972921 144 89 83 1 429 1 974 1117 KAF1314525.1 Regulator of chromosome condensation, partial [Globisporangium splendens] diamond 432 102 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
26821285 26821285 PRJNA312899_P_NODE_11241_length_564_cov_5.157282_g10822_i0 PRJNA312899 11241 564 5.157282 29.08707048 Phytophthora infestans T3 4787 SAR_Eukaryotes SAR_Eukaryotes 119 1.4900000000000002e-27   NR XP_002902687.1 403677 g10822 i0 50.9 0.563829787234043 106 52 56.4 0 239 556 556 661 XP_002902687.1 NADPH-cytochrome P450 reductase, putative [Phytophthora infestans T30-4] diamond 318 119 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
27123141 27123141 PRJNA312899_P_NODE_45782_length_260_cov_2.658768_g45340_i0 PRJNA312899 45782 260 2.658768 6.9127968 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 110 1.14e-26   NR RHY87967.1 112090 g45340 i0 60.7 12.5423076923077 84 32 95.8 1 250 2 97 180 RHY87967.1 hypothetical protein DYB35_007045 [Aphanomyces astaci] diamond 3261 110 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
27597501 27597501 PRJNA312899_P_NODE_12844_length_527_cov_33.663180_g12415_i0 PRJNA312899 12844 527 33.66318 177.4049586 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 134 2.67e-33   NR KAG1710905.1 4784 g12415 i0 59 4.65085388994307 117 34 66.6 1 525 175 399 501 KAG1710905.1 hypothetical protein DVH05_013627 [Phytophthora capsici] diamond 2451 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
27629108 27629108 PRJNA312899_P_NODE_3464_length_934_cov_7.715254_g3209_i0 PRJNA312899 3464 934 7.715254 72.06047236 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 299 5.459999999999998e-96   NR TMW60187.1 41045 g3209 i0 56.3 5.06852248394004 263 110 84.5 2 934 146 132 389 TMW60187.1 hypothetical protein Poli38472_000229 [Pythium oligandrum] diamond 4734 301 0.993355481727575 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
27818582 27818582 PRJNA312899_P_NODE_9264_length_620_cov_44.697023_g8870_i0 PRJNA312899 9264 620 44.697023 277.1215426 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 119 2.68e-27   NR KUF98385.1 4792 g8870 i0 44.8 2.29838709677419 116 64 56.1 0 43 390 535 650 KUF98385.1 Aladin [Phytophthora nicotianae] diamond 1425 120 0.991666666666667 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
27895458 27895458 PRJNA312899_P_NODE_40405_length_281_cov_1.310345_g39963_i0 PRJNA312899 40405 281 1.310345 3.68206945 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 83.2 3.59e-16   NR OQR91845.1 1202772 g39963 i0 44.7 1.00355871886121 94 50 98.2 1 6 281 191 284 OQR91845.1 transmembrane protein [Achlya hypogyna] diamond 282 83.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
28495594 28495594 PRJNA312899_P_NODE_16987_length_458_cov_4.843521_g16548_i0 PRJNA312899 16987 458 4.843521 22.18332618 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 63.2 2.87e-8   NR XP_012209850.1 695850 g16548 i0 28.6 0.962882096069869 147 102 94.3 3 451 20 55 201 XP_012209850.1 hypothetical protein SPRG_15414 [Saprolegnia parasitica CBS 223.65] diamond 441 63.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
28748037 28748037 PRJNA312899_P_NODE_31427_length_328_cov_2.193548_g30985_i0 PRJNA312899 31427 328 2.193548 7.19483744 Phytophthora capsici 4784 SAR_Eukaryotes SAR_Eukaryotes 50.1 2.32e-5   NR KAG1700710.1 4784 g30985 i0 41.3 1.3719512195122 75 43 68.6 1 297 73 7 80 KAG1700710.1 hypothetical protein DVH05_011569 [Phytophthora capsici] diamond 450 50.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
28765494 28765494 PRJNA312899_P_NODE_52267_length_239_cov_3.721053_g51825_i0 PRJNA312899 52267 239 3.721053 8.89331667 root 1 Root_unresolved Root_unresolved 45.8 0.00222   NR AIG56449.1 1202772 g51825 i0 69.6 1.15481171548117 23 7 28.9 0 1 69 91 113 AIG56449.1 secreted protein [Achlya hypogyna] diamond 276 45.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
29428399 29428399 PRJNA312899_P_NODE_64349_length_207_cov_1.873418_g63907_i0 PRJNA312899 64349 207 1.873418 3.87797526 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 79 1.49e-15   NR KAI9996756.1 4787 g63907 i0 89.7 3.33333333333333 39 4 56.5 0 203 87 252 290 KAI9996756.1 hypothetical protein PInf_000017 [Phytophthora infestans] diamond 690 79 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
29726560 29726560 PRJNA312899_P_NODE_10710_length_578_cov_5.319471_g10296_i0 PRJNA312899 10710 578 5.319471 30.74654238 Peronospora belbahrii 622444 SAR_Eukaryotes SAR_Eukaryotes 121 3.71e-28   NR CAH0517053.1 622444 g10296 i0 72.8 0.752595155709343 81 22 42 0 41 283 450 530 CAH0517053.1 unnamed protein product [Peronospora belbahrii] diamond 435 121 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
29870693 29870693 PRJNA312899_P_NODE_57651_length_224_cov_1.725714_g57209_i0 PRJNA312899 57651 224 1.725714 3.86559936 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 68.6 2.27e-11   NR RQM20636.1 112090 g57209 i0 50 3.42857142857143 64 32 85.7 0 29 220 325 388 RQM20636.1 hypothetical protein B5M09_000397 [Aphanomyces astaci] diamond 768 68.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
30011261 30011261 PRJNA312899_P_NODE_7351_length_687_cov_6.637931_g6986_i0 PRJNA312899 7351 687 6.637931 45.60258597 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 63.2 2.05e-7   NR KAF1328509.1 82926 g6986 i0 27 0.663755458515284 152 100 65.5 2 686 237 3418 3560 KAF1328509.1 Ubiquitin carboxyl-terminal hydrolase 34, partial [Globisporangium splendens] diamond 456 63.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
30074156 30074156 PRJNA312899_P_NODE_60972_length_215_cov_9.180723_g60530_i0 PRJNA312899 60972 215 9.180723 19.73855445 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 60.8 5.42e-9   NR OQR80448.1 74557 g60530 i0 49.1 1.57674418604651 57 28 78.1 1 48 215 9 65 OQR80448.1 ankyrin repeat domain-containing protein 50-like, partial [Thraustotheca clavata] diamond 339 60.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30105753 30105753 PRJNA312899_P_NODE_10872_length_574_cov_8.028571_g10456_i0 PRJNA312899 10872 574 8.028571 46.08399754 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 50.4 3.2e-4   NR OQR89238.1 74557 g10456 i0 51 1.57839721254355 51 24 26.1 1 239 90 88 138 OQR89238.1 hypothetical protein THRCLA_22722 [Thraustotheca clavata] diamond 906 50.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30769479 30769479 PRJNA312899_P_NODE_29994_length_337_cov_4.013889_g29552_i0 PRJNA312899 29994 337 4.013889 13.52680593 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 55.1 4.53e-7   NR DAZ99657.1 4803 g29552 i0 49 0.454005934718101 51 26 45.4 0 228 76 47 97 DAZ99657.1 TPA: hypothetical protein N0F65_001894 [Lagenidium giganteum] diamond 153 55.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31148117 31148117 PRJNA312899_P_NODE_71875_length_190_cov_1.248227_g71433_i0 PRJNA312899 71875 190 1.248227 2.3716313 Hyaloperonospora arabidopsidis 272952 SAR_Eukaryotes SAR_Eukaryotes 113 1.78e-30   NR YP_010394014.1 272952 g71433 i0 92.1 0.994736842105263 63 5 99.5 0 2 190 67 129 YP_010394014.1 ribosomal protein S13 [Hyaloperonospora arabidopsidis] diamond 189 113 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora arabidopsidis
31514229 31514229 PRJNA312899_P_NODE_50976_length_243_cov_2.608247_g50534_i0 PRJNA312899 50976 243 2.608247 6.33804021 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 106 1.5399999999999999e-24   NR RQM20060.1 112090 g50534 i0 70.1 3.80246913580247 77 21 92.6 1 226 2 22 98 RQM20060.1 hypothetical protein B5M09_010909 [Aphanomyces astaci] diamond 924 107 0.990654205607477 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
32083298 32083298 PRJNA312899_P_NODE_41998_length_274_cov_4.071111_g41556_i0 PRJNA312899 41998 274 4.071111 11.15484414 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 111 3.25e-26   NR XP_024572896.1 4781 g41556 i0 69 19.8613138686131 71 22 77.7 0 5 217 662 732 XP_024572896.1 amp deaminase [Plasmopara halstedii] diamond 5442 111 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
32097382 32097382 PRJNA312899_P_NODE_18198_length_442_cov_36.249364_g17757_i0 PRJNA312899 18198 442 36.249364 160.22218888 Phytophthora nicotianae P1 4792 SAR_Eukaryotes SAR_Eukaryotes 274 4.6e-92   NR ETP28243.1 1317064 g17757 i0 99.3 0.997737556561086 147 1 99.8 0 442 2 6 152 ETP28243.1 hypothetical protein F442_22471, partial [Phytophthora nicotianae P10297] diamond 441 274 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
32589672 32589672 PRJNA312899_P_NODE_29019_length_343_cov_9.605442_g28577_i0 PRJNA312899 29019 343 9.605442 32.94666606 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 66.6 2.88e-10   NR OQR99551.1 74557 g28577 i0 43.3 3.30612244897959 97 53 84 2 340 53 186 281 OQR99551.1 hypothetical protein THRCLA_06462 [Thraustotheca clavata] diamond 1134 67 0.994029850746269 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;