RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA312899" and tax_phylum = "Candidatus Poribacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28211107 28211107 PRJNA312899_P_NODE_24306_length_380_cov_7.752266_g23864_i0 PRJNA312899 24306 380 7.752266 29.4586108 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 76.6 1.26e-13   NR MAF08945.1 2026781 g23864 i0 51.4 0.568421052631579 72 35 56.8 0 217 2 12 83 MAF08945.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Poribacteria bacterium] diamond 216 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30105762 30105762 PRJNA312899_P_NODE_23852_length_384_cov_6.462687_g23410_i0 PRJNA312899 23852 384 6.462687 24.81671808 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 76.6 1.31e-13   NR MAF08945.1 2026781 g23410 i0 51.4 0.5625 72 35 56.3 0 168 383 12 83 MAF08945.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Poribacteria bacterium] diamond 216 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30105800 30105800 PRJNA312899_P_NODE_92372_length_165_cov_0.879310_g91930_i0 PRJNA312899 92372 165 0.87931 1.4508615 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 56.2 2.3e-7   NR MDE0085217.1 2026781 g91930 i0 43.1 1.05454545454545 58 28 96.4 2 1 159 521 578 MDE0085217.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 174 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30137127 30137127 PRJNA312899_P_NODE_9532_length_612_cov_37.827709_g9136_i0 PRJNA312899 9532 612 37.827709 231.50557908 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 77.4 1.63e-13   NR MYC75670.1 2026781 g9136 i0 31.3 0.985294117647059 201 122 97.5 7 597 1 17 203 MYC75670.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 603 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;