RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA312899" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA312899 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26884602 26884602 PRJNA312899_P_NODE_10321_length_588_cov_49.187384_g9910_i0 PRJNA312899 10321 588 49.187384 289.22181792 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 54.7 6.44e-5   NR MFH1868393.1 2035772 g9910 i0 38.8 1.12755102040816 80 49 40.8 0 184 423 26 105 MFH1868393.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 663 54.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28400740 28400740 PRJNA312899_P_NODE_35286_length_305_cov_5.453125_g34844_i0 PRJNA312899 35286 305 5.453125 16.63203125 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 97.8 2.2e-21   NR HSV28422.1 2035772 g34844 i0 51 1.00327868852459 102 49 99.3 1 2 304 340 441 HSV28422.1 autotransporter-associated beta strand repeat-containing protein [Candidatus Omnitrophota bacterium] diamond 306 97.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29694919 29694919 PRJNA312899_P_NODE_16030_length_471_cov_17.684834_g15592_i0 PRJNA312899 16030 471 17.684834 83.29556814 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 69.7 1.68e-11   NR MFA7001876.1 2035772 g15592 i0 45.7 1.10191082802548 81 36 51.6 1 345 103 20 92 MFA7001876.1 rhodanese-like domain-containing protein [Candidatus Omnitrophota bacterium] diamond 519 69.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;