RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA312899" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312899 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26807063 26807063 PRJNA312899_P_NODE_65641_length_204_cov_1.316129_g65199_i0 PRJNA312899 65641 204 1.316129 2.68490316 Bacteria 2 Bacteria Bacteria 113 2.61e-27   NR HXP71060.1 2052315 g65199 i0 84.1 1.85294117647059 63 10 92.6 0 15 203 272 334 HXP71060.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 378 113 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27611530 27611530 PRJNA312899_P_NODE_92564_length_165_cov_0.879310_g92122_i0 PRJNA312899 92564 165 0.87931 1.4508615 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 70.9 1.53e-12   NR HVC00152.1 2052315 g92122 i0 66 2.72727272727273 50 17 90.9 0 14 163 1 50 HVC00152.1 AAA family ATPase [Candidatus Dormiibacterota bacterium] diamond 450 70.9 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31433101 31433101 PRJNA312899_P_NODE_78656_length_181_cov_1.439394_g78214_i0 PRJNA312899 78656 181 1.439394 2.60530314 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 79.3 1.77e-15   NR HEX6348727.1 2052315 g78214 i0 66.7 2.98342541436464 60 20 99.4 0 2 181 301 360 HEX6348727.1 glycosyltransferase family 4 protein [Candidatus Dormiibacterota bacterium] diamond 540 79.3 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;