contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA312615" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19504123 | 19504123 | PRJNA312615_P_NODE_29776_length_224_cov_1.451429_g29625_i0 | PRJNA312615 | 29776 | 224 | 1.451429 | 3.25120096 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 129 | 4.58e-36 | NR | MCC5815248.1 | 178 | g29625 | i0 | 79.7 | 78.2946428571429 | 74 | 15 | 99.1 | 0 | 223 | 2 | 29 | 102 | MCC5815248.1 glycine dehydrogenase (aminomethyl-transferring) [Leptospira sp.] | diamond | 17538 | 130 | 0.992307692307692 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. | ||
| 22055379 | 22055379 | PRJNA312615_P_NODE_9518_length_401_cov_2.437500_g9368_i0 | PRJNA312615 | 9518 | 401 | 2.4375 | 9.774375 | Bacteria | 2 | Bacteria | Bacteria | 215 | 2.84e-65 | NR | WP_014804737.1 | 29510 | g9368 | i0 | 79.4 | 39.0897755610973 | 131 | 26 | 98 | 1 | 4 | 396 | 15 | 144 | WP_014804737.1 adenosylhomocysteinase [Turneriella parva] | diamond | 15675 | 217 | 0.990783410138249 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 27706470 | 27706470 | PRJNA312615_P_NODE_6384_length_482_cov_1.563510_g6236_i0 | PRJNA312615 | 6384 | 482 | 1.56351 | 7.5361182 | Treponema sp. | 166 | Bacteria | Bacteria | 63.2 | 2.97e-8 | NR | MDR1787852.1 | 166 | g6236 | i0 | 50.7 | 0.896265560165975 | 71 | 30 | 44.2 | 2 | 14 | 226 | 138 | 203 | MDR1787852.1 CAP domain-containing protein [Treponema sp.] | diamond | 432 | 63.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28653356 | 28653356 | PRJNA312615_P_NODE_507_length_1266_cov_3.333607_g445_i0 | PRJNA312615 | 507 | 1266 | 3.333607 | 42.20346462 | Termitinemataceae bacterium | 3022875 | Bacteria | Bacteria | 70.9 | 1.02e-9 | NR | GMO38143.1 | 3022875 | g445 | i0 | 29 | 1.03080568720379 | 145 | 91 | 34.1 | 3 | 1238 | 807 | 129 | 262 | GMO38143.1 MAG: hypothetical protein Ta2F_14260 [Termitinemataceae bacterium] | diamond | 1305 | 70.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Termitinemataceae | Termitinemataceae bacterium | |||
| 29568890 | 29568890 | PRJNA312615_P_NODE_35870_length_205_cov_1.282051_g35719_i0 | PRJNA312615 | 35870 | 205 | 1.282051 | 2.62820455 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 62.4 | 2.23e-9 | NR | MBE7440661.1 | 2026792 | g35719 | i0 | 47.6 | 0.921951219512195 | 63 | 30 | 89.3 | 2 | 22 | 204 | 74 | 135 | MBE7440661.1 endonuclease/exonuclease/phosphatase family protein [Spirochaetales bacterium] | diamond | 189 | 62.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;