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781 rows where analysis = "diamond", bioproject = "PRJNA312615" and tax_phylum = "Pseudomonadota"

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tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 781 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312615 · 781 ✖

analysis 1

  • diamond · 781 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
377800 377800 PRJNA312615_P_NODE_15461_length_313_cov_1.166667_g15310_i0 PRJNA312615 15461 313 1.166667 3.65166771 Salmonella enterica 28901 Bacteria Bacteria 85.9 1.81e-17   NR MCQ7506103.1 28901 g15310 i0 73.8 0.584664536741214 61 10 52.7 2 293 129 249 309 MCQ7506103.1 hypothetical protein [Salmonella enterica] diamond 183 85.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica
378143 378143 PRJNA312615_P_NODE_30101_length_223_cov_1.172414_g29950_i0 PRJNA312615 30101 223 1.172414 2.61448322 SAR116 cluster bacterium 2024888 Bacteria Bacteria 92.8 3.2e-20   NR MAJ15045.1 2024888 g29950 i0 63.9 4.73542600896861 72 26 96.9 0 2 217 239 310 MAJ15045.1 acyl-CoA dehydrogenase [SAR116 cluster bacterium] diamond 1056 92.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Candidatus Puniceispirillales     SAR116 cluster bacterium
378233 378233 PRJNA312615_P_NODE_34361_length_209_cov_1.406250_g34210_i0 PRJNA312615 34361 209 1.40625 2.9390625 Bradyrhizobium 374 Bacteria Bacteria 120 5.3e-33   NR WP_298368858.1 376 g34210 i0 82.6 3.91866028708134 69 12 99 0 208 2 66 134 WP_298368858.1 DUF302 domain-containing protein [Bradyrhizobium sp.] diamond 819 120 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
1064019 1064019 PRJNA312615_P_NODE_41501_length_190_cov_1.382979_g41350_i0 PRJNA312615 41501 190 1.382979 2.6276601 Methylobacterium komagatae 374425 Bacteria Bacteria 95.5 8.26e-22   NR WP_378975656.1 374425 g41350 i0 92 0.789473684210526 50 4 78.9 0 152 3 74 123 WP_378975656.1 zinc-dependent alcohol dehydrogenase [Methylobacterium komagatae] diamond 150 95.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium komagatae
1652658 1652658 PRJNA312615_P_NODE_17542_length_292_cov_1.794239_g17391_i0 PRJNA312615 17542 292 1.794239 5.23917788 Bradyrhizobium denitrificans 2734912 Bacteria Bacteria 192 4.819999999999998e-56   NR WP_211400778.1 2734912 g17391 i0 99 0.996575342465753 97 1 99.7 0 1 291 334 430 WP_211400778.1 ABC transporter ATP-binding protein [Bradyrhizobium denitrificans] diamond 291 192 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium denitrificans
1652985 1652985 PRJNA312615_P_NODE_32282_length_215_cov_1.855422_g32131_i0 PRJNA312615 32282 215 1.855422 3.9891573 Bradyrhizobium sp. RD5-C2 244562 Bacteria Bacteria 126 1.0599999999999998e-31   NR WP_223967768.1 244562 g32131 i0 94.4 0.990697674418605 71 4 99.1 0 2 214 537 607 WP_223967768.1 hypothetical protein [Bradyrhizobium sp. RD5-C2] diamond 213 126 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. RD5-C2
1653060 1653060 PRJNA312615_P_NODE_36102_length_204_cov_1.870968_g35951_i0 PRJNA312615 36102 204 1.870968 3.81677472 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 123 3.52e-34   NR WP_100954059.1 2057741 g35951 i0 88.1 2.95588235294118 67 8 98.5 0 202 2 34 100 WP_100954059.1 GNAT family N-acetyltransferase [Bradyrhizobium sp. SK17] diamond 603 123 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
1653177 1653177 PRJNA312615_P_NODE_41942_length_189_cov_1.364286_g41791_i0 PRJNA312615 41942 189 1.364286 2.57850054 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 124 2.46e-31   NR WP_211969543.1 2631580 g41791 i0 96.7 0.968253968253968 61 2 96.8 0 6 188 176 236 WP_211969543.1 MULTISPECIES: sensor histidine kinase [unclassified Bradyrhizobium] diamond 183 124 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
1653492 1653492 PRJNA312615_P_NODE_58162_length_162_cov_0.902655_g58011_i0 PRJNA312615 58162 162 0.902655 1.4623011 Bradyrhizobium diazoefficiens 1355477 Bacteria Bacteria 85.5 1.04e-17   NR WP_200473933.1 1355477 g58011 i0 92 0.925925925925926 50 3 90.7 1 147 1 1 50 WP_200473933.1 terminase family protein [Bradyrhizobium diazoefficiens] diamond 150 85.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium diazoefficiens
2339000 2339000 PRJNA312615_P_NODE_20262_length_270_cov_4.678733_g20111_i0 PRJNA312615 20262 270 4.678733 12.6325791 Bradyrhizobium 374 Bacteria Bacteria 190 1.64e-59   NR WP_315586111.1 374 g20111 i0 100 0.988888888888889 89 0 98.9 0 2 268 76 164 WP_315586111.1 MULTISPECIES: superoxide dismutase [Bradyrhizobium] diamond 267 190 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
2928311 2928311 PRJNA312615_P_NODE_10163_length_389_cov_1.688235_g10013_i0 PRJNA312615 10163 389 1.688235 6.56723415 Bradyrhizobium 374 Bacteria Bacteria 125 1.69e-30   NR WP_315585988.1 374 g10013 i0 97.1 0.532133676092545 69 2 53.2 0 143 349 1 69 WP_315585988.1 MULTISPECIES: heme lyase CcmF/NrfE family subunit [Bradyrhizobium] diamond 207 125 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
2928389 2928389 PRJNA312615_P_NODE_1243_length_913_cov_2.064815_g1136_i0 PRJNA312615 1243 913 2.064815 18.85176095 Bradyrhizobium sp. 376 Bacteria Bacteria 528 1.39e-185   NR WP_409875281.1 376 g1136 i0 97.4 0.998904709748083 304 8 99.9 0 2 913 25 328 WP_409875281.1 type IV secretion system protein VirB10 [Bradyrhizobium sp.] diamond 912 528 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
2928442 2928442 PRJNA312615_P_NODE_14603_length_321_cov_2.297794_g14452_i0 PRJNA312615 14603 321 2.297794 7.37591874 Bradyrhizobium 374 Bacteria Bacteria 221 1.26e-71   NR WP_172240171.1 374 g14452 i0 100 0.990654205607477 106 0 99.1 0 3 320 86 191 WP_172240171.1 MULTISPECIES: DUF1419 domain-containing protein [Bradyrhizobium] diamond 318 221 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
2928486 2928486 PRJNA312615_P_NODE_16323_length_304_cov_1.376471_g16172_i0 PRJNA312615 16323 304 1.376471 4.18447184 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 144 1.28e-42   NR WP_298277562.1 199684 g16172 i0 94.9 0.779605263157895 79 4 78 0 18 254 13 91 WP_298277562.1 hypothetical protein [uncultured Bradyrhizobium sp.] diamond 237 144 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
2928735 2928735 PRJNA312615_P_NODE_26203_length_239_cov_1.073684_g26052_i0 PRJNA312615 26203 239 1.073684 2.56610476 Undibacterium luofuense 2828733 Bacteria Bacteria 156 2.07e-45   NR WP_212687264.1 2828733 g26052 i0 98.7 0.99163179916318 79 1 99.2 0 238 2 17 95 WP_212687264.1 3-deoxy-8-phosphooctulonate synthase [Undibacterium luofuense] diamond 237 156 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
2928736 2928736 PRJNA312615_P_NODE_26223_length_239_cov_0.915789_g26072_i0 PRJNA312615 26223 239 0.915789 2.18873571 Bradyrhizobium 374 Bacteria Bacteria 143 3.37e-39   NR WP_043855259.1 374 g26072 i0 87.3 0.99163179916318 79 10 99.2 0 2 238 47 125 WP_043855259.1 MULTISPECIES: hypothetical protein [Bradyrhizobium] diamond 237 143 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
2929160 2929160 PRJNA312615_P_NODE_4763_length_549_cov_1.548000_g4617_i0 PRJNA312615 4763 549 1.548 8.49852 Bradyrhizobium sp. OHSU_III 1297865 Bacteria Bacteria 367 4.89e-124   NR WP_024584957.1 1297865 g4617 i0 98.9 0.983606557377049 180 2 98.4 0 1 540 290 469 WP_024584957.1 type I glutamate--ammonia ligase [Bradyrhizobium sp. OHSU_III] diamond 540 367 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. OHSU_III
2929263 2929263 PRJNA312615_P_NODE_52483_length_166_cov_0.888889_g52332_i0 PRJNA312615 52483 166 0.888889 1.47555574 Pseudomonas sp. 306 Bacteria Bacteria 101 2.3699999999999998e-23   NR HLV15992.1 306 g52332 i0 87.3 0.993975903614458 55 7 99.4 0 2 166 1909 1963 HLV15992.1 PLxRFG domain-containing protein [Pseudomonas sp.] diamond 165 101 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp.
2929268 2929268 PRJNA312615_P_NODE_52663_length_166_cov_0.888889_g52512_i0 PRJNA312615 52663 166 0.888889 1.47555574 Methylorubrum rhodinum 29428 Bacteria Bacteria 80.9 9.01e-19   NR WP_183571818.1 29428 g52512 i0 81 0.759036144578313 42 8 75.9 0 126 1 1 42 WP_183571818.1 cytochrome bd-I oxidase subunit CydX [Methylorubrum rhodinum] diamond 126 80.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
3614424 3614424 PRJNA312615_P_NODE_29663_length_224_cov_3.120000_g29512_i0 PRJNA312615 29663 224 3.12 6.9888 Klebsiella pneumoniae 573 Bacteria Bacteria 153 3.59e-45   NR WP_136666238.1 573 g29512 i0 100 1.96875 74 0 99.1 0 222 1 48 121 WP_136666238.1 DUF7007 domain-containing protein, partial [Klebsiella pneumoniae] diamond 441 153 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
4204932 4204932 PRJNA312615_P_NODE_11984_length_357_cov_2.048701_g11834_i0 PRJNA312615 11984 357 2.048701 7.31386257 Bradyrhizobium sp. 376 Bacteria Bacteria 180 2.4399999999999995e-55   NR WP_298379557.1 376 g11834 i0 93.7 0.798319327731092 95 6 79.8 0 73 357 1 95 WP_298379557.1 hypothetical protein [Bradyrhizobium sp.] diamond 285 180 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
4205357 4205357 PRJNA312615_P_NODE_29464_length_225_cov_1.750000_g29313_i0 PRJNA312615 29464 225 1.75 3.9375 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 146 7.49e-40   NR WP_212310175.1 2631580 g29313 i0 98.6 0.986666666666667 74 1 98.7 0 3 224 367 440 WP_212310175.1 MULTISPECIES: hypothetical protein [unclassified Bradyrhizobium] diamond 222 146 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
4205452 4205452 PRJNA312615_P_NODE_34364_length_209_cov_1.375000_g34213_i0 PRJNA312615 34364 209 1.375 2.87375 Afipia sp. 1871052 Bacteria Bacteria 132 1.75e-36   NR MBR2117379.1 1871052 g34213 i0 97.1 0.990430622009569 69 2 99 0 1 207 46 114 MBR2117379.1 DUF2189 domain-containing protein [Afipia sp.] diamond 207 132 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
4205513 4205513 PRJNA312615_P_NODE_3764_length_605_cov_2.278777_g3625_i0 PRJNA312615 3764 605 2.278777 13.78660085 Bradyrhizobium 374 Bacteria Bacteria 385 2.5299999999999996e-128   NR WP_315585988.1 374 g3625 i0 100 0.996694214876033 201 0 99.7 0 604 2 338 538 WP_315585988.1 MULTISPECIES: heme lyase CcmF/NrfE family subunit [Bradyrhizobium] diamond 603 385 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
4205619 4205619 PRJNA312615_P_NODE_42864_length_187_cov_1.108696_g42713_i0 PRJNA312615 42864 187 1.108696 2.07326152 Pseudomonas faucium 2740518 Bacteria Bacteria 125 6.37e-33   NR WP_236235623.1 2740518 g42713 i0 100 0.978609625668449 61 0 97.9 0 3 185 242 302 WP_236235623.1 ferredoxin--NADP reductase [Pseudomonas faucium] diamond 183 125 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas faucium
4891603 4891603 PRJNA312615_P_NODE_20364_length_270_cov_1.366516_g20213_i0 PRJNA312615 20364 270 1.366516 3.6895932 Pseudomonadota bacterium 1977087 Bacteria Bacteria 110 1.06e-25   NR NBR94814.1 1977087 g20213 i0 56.2 0.988888888888889 89 39 98.9 0 3 269 816 904 NBR94814.1 2-oxoglutarate dehydrogenase E1 component [Pseudomonadota bacterium] diamond 267 110 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
4891938 4891938 PRJNA312615_P_NODE_50044_length_169_cov_0.866667_g49893_i0 PRJNA312615 50044 169 0.866667 1.46466723 Bacteria 2 Bacteria Bacteria 108 1.45e-28   NR MWO20054.1 562 g49893 i0 92.6 1.91715976331361 54 4 95.9 0 169 8 50 103 MWO20054.1 galactokinase [Escherichia coli] diamond 324 108 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
5481381 5481381 PRJNA312615_P_NODE_18465_length_284_cov_1.110638_g18314_i0 PRJNA312615 18465 284 1.110638 3.15421192 Undibacterium squillarum 1131567 Bacteria Bacteria 91.3 1.55e-19   NR WP_229793006.1 1131567 g18314 i0 94.7 0.992957746478873 94 5 99.3 0 2 283 42 135 WP_229793006.1 cell envelope integrity protein TolA [Undibacterium squillarum] diamond 282 91.3 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
5481793 5481793 PRJNA312615_P_NODE_38705_length_197_cov_1.574324_g38554_i0 PRJNA312615 38705 197 1.574324 3.10141828 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 125 1.1399999999999999e-31   NR WP_211965748.1 2631580 g38554 i0 93.8 0.989847715736041 65 4 99 0 1 195 493 557 WP_211965748.1 MULTISPECIES: ABC transporter ATP-binding protein [unclassified Bradyrhizobium] diamond 195 125 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
5481810 5481810 PRJNA312615_P_NODE_39705_length_195_cov_0.869863_g39554_i0 PRJNA312615 39705 195 0.869863 1.69623285 Pseudomonadota 1224 Bacteria Bacteria 73.2 2.86e-13   NR WP_272873625.1 327160 g39554 i0 62.1 3 66 24 100 1 195 1 280 345 WP_272873625.1 Calx-beta domain-containing protein, partial [Candidatus Accumulibacter phosphatis] diamond 585 73.2 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria     Candidatus Accumulibacter Candidatus Accumulibacter phosphatis
6755677 6755677 PRJNA312615_P_NODE_24126_length_248_cov_2.562814_g23975_i0 PRJNA312615 24126 248 2.562814 6.35577872 Xanthomonas oryzae 347 Bacteria Bacteria 166 5.76e-50   NR WP_218621699.1 347 g23975 i0 100 0.991935483870968 82 0 99.2 0 1 246 85 166 WP_218621699.1 hypothetical protein, partial [Xanthomonas oryzae] diamond 246 166 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Xanthomonas Xanthomonas oryzae
6755725 6755725 PRJNA312615_P_NODE_26146_length_239_cov_1.489474_g25995_i0 PRJNA312615 26146 239 1.489474 3.55984286 Undibacterium squillarum 1131567 Bacteria Bacteria 150 2.32e-40   NR WP_308427093.1 1131567 g25995 i0 100 0.99163179916318 79 0 99.2 0 1 237 503 581 WP_308427093.1 ATP-dependent zinc metalloprotease FtsH [Undibacterium squillarum] diamond 237 150 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
6756084 6756084 PRJNA312615_P_NODE_43566_length_185_cov_1.485294_g43415_i0 PRJNA312615 43566 185 1.485294 2.7477939 Sphingomonas sp. Leaf67 1736230 Bacteria Bacteria 113 1.54e-28   NR WP_056003276.1 1736230 g43415 i0 93.4 1.97837837837838 61 4 98.9 0 184 2 82 142 WP_056003276.1 potassium channel family protein [Sphingomonas sp. Leaf67] diamond 366 113 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. Leaf67
7441945 7441945 PRJNA312615_P_NODE_43266_length_186_cov_1.124088_g43115_i0 PRJNA312615 43266 186 1.124088 2.09080368 Bradyrhizobium sp. URHD 376 Bacteria Bacteria 108 5.57e-26   NR WP_081851404.1 1380355 g43115 i0 88.5 0.983870967741935 61 7 98.4 0 2 184 184 244 WP_081851404.1 CpaF family protein [Bradyrhizobium sp. URHD0069] diamond 183 108 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. URHD0069
8031213 8031213 PRJNA312615_P_NODE_22127_length_259_cov_1.980952_g21976_i0 PRJNA312615 22127 259 1.980952 5.13066568 Bacteria 2 Bacteria Bacteria 159 1.35e-43   NR RIK96417.1 1977087 g21976 i0 85.9 174.266409266409 85 12 98.5 0 3 257 222 306 RIK96417.1 MAG: succinate dehydrogenase flavoprotein subunit [Pseudomonadota bacterium] diamond 45135 159 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
8031833 8031833 PRJNA312615_P_NODE_52927_length_166_cov_0.871795_g52776_i0 PRJNA312615 52927 166 0.871795 1.4471797 Methylorubrum salsuginis 414703 Bacteria Bacteria 99 6.83e-24   NR WP_091942581.1 414703 g52776 i0 95.7 0.831325301204819 46 2 83.1 0 14 151 1 46 WP_091942581.1 protein glxC [Methylorubrum salsuginis] diamond 138 99 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum salsuginis
8031923 8031923 PRJNA312615_P_NODE_58047_length_162_cov_0.902655_g57896_i0 PRJNA312615 58047 162 0.902655 1.4623011 Undibacterium luofuense 2828733 Bacteria Bacteria 113 1.4e-27   NR WP_212687404.1 2828733 g57896 i0 100 0.981481481481482 53 0 98.1 0 161 3 1018 1070 WP_212687404.1 error-prone DNA polymerase [Undibacterium luofuense] diamond 159 113 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
9305955 9305955 PRJNA312615_P_NODE_19728_length_274_cov_1.808889_g19577_i0 PRJNA312615 19728 274 1.808889 4.95635586 Bradyrhizobium sp. 41S5 1404443 Bacteria Bacteria 170 6.4999999999999985e-47   NR WP_173639493.1 1404443 g19577 i0 91.1 0.985401459854015 90 8 98.5 0 273 4 435 524 WP_173639493.1 ribosome-associated ATPase/putative transporter RbbA [Bradyrhizobium sp. 41S5] diamond 270 170 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. 41S5
9306353 9306353 PRJNA312615_P_NODE_3848_length_601_cov_2.126812_g3708_i0 PRJNA312615 3848 601 2.126812 12.78214012 Bradyrhizobium 374 Bacteria Bacteria 384 1.07e-128   NR WP_315585990.1 374 g3708 i0 99.5 0.998336106489185 200 1 99.8 0 601 2 64 263 WP_315585990.1 MULTISPECIES: peptidoglycan D,D-transpeptidase FtsI family protein [Bradyrhizobium] diamond 600 384 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
9306469 9306469 PRJNA312615_P_NODE_44188_length_183_cov_3.044776_g44037_i0 PRJNA312615 44188 183 3.044776 5.57194008 Rhodobacterales bacterium CG_4_1 1948890 Bacteria Bacteria 67 1.96e-11   NR PIY73259.1 1974084 g44037 i0 55.9 0.967213114754098 59 26 96.7 0 178 2 114 172 PIY73259.1 MAG: hypothetical protein COY86_07465 [Rhodobacterales bacterium CG_4_10_14_0_8_um_filter_70_9] diamond 177 67 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales     Rhodobacterales bacterium CG_4_10_14_0_8_um_filter_70_9
9306615 9306615 PRJNA312615_P_NODE_51108_length_167_cov_1.296610_g50957_i0 PRJNA312615 51108 167 1.29661 2.1653387 Hyphomicrobiales 356 Bacteria Bacteria 120 1.79e-30   NR WP_015822460.1 408 g50957 i0 98.2 1.97604790419162 55 1 98.8 0 165 1 210 264 WP_015822460.1 type I glutamate--ammonia ligase [Methylorubrum extorquens] diamond 330 120 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum extorquens
9992174 9992174 PRJNA312615_P_NODE_43928_length_184_cov_1.511111_g43777_i0 PRJNA312615 43928 184 1.511111 2.78044424 Bradyrhizobium sp. NP1 3049772 Bacteria Bacteria 114 6.87e-29   NR WP_289658358.1 3049772 g43777 i0 93.4 0.994565217391304 61 4 99.5 0 184 2 56 116 WP_289658358.1 ATP-binding protein [Bradyrhizobium sp. NP1] diamond 183 114 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. NP1
9992177 9992177 PRJNA312615_P_NODE_44108_length_184_cov_1.125926_g43957_i0 PRJNA312615 44108 184 1.125926 2.07170384 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 130 1.51e-33   NR WP_298281595.1 199684 g43957 i0 100 0.994565217391304 61 0 99.5 0 183 1 462 522 WP_298281595.1 NAD-dependent epimerase/dehydratase family protein [uncultured Bradyrhizobium sp.] diamond 183 130 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
10581679 10581679 PRJNA312615_P_NODE_12089_length_356_cov_1.127036_g11939_i0 PRJNA312615 12089 356 1.127036 4.01224816 Rhodospirillales bacterium 2026786 Bacteria Bacteria 81.3 8.09e-16   NR MCB9965099.1 2026786 g11939 i0 61.4 4.12921348314607 70 27 59 0 2 211 185 254 MCB9965099.1 electron transfer flavoprotein subunit beta/FixA family protein [Rhodospirillales bacterium] diamond 1470 81.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales     Rhodospirillales bacterium
11266951 11266951 PRJNA312615_P_NODE_19389_length_277_cov_0.894737_g19238_i0 PRJNA312615 19389 277 0.894737 2.47842149 Bradyrhizobium 374 Bacteria Bacteria 146 6.6799999999999996e-43   NR WP_018456817.1 1040988 g19238 i0 71.8 1.84115523465704 85 24 92.1 0 9 263 37 121 WP_018456817.1 hypothetical protein [Bradyrhizobium sp. WSM4349] diamond 510 146 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. WSM4349
11267095 11267095 PRJNA312615_P_NODE_33569_length_211_cov_1.888889_g33418_i0 PRJNA312615 33569 211 1.888889 3.98555579 Methylorubrum suomiense 144191 Bacteria Bacteria 90.1 2.77e-19   NR WP_137829342.1 144191 g33418 i0 82 0.867298578199052 61 11 86.7 0 29 211 1 61 WP_137829342.1 L-dopachrome tautomerase-related protein [Methylorubrum suomiense] diamond 183 90.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum suomiense
11267190 11267190 PRJNA312615_P_NODE_42709_length_187_cov_1.478261_g42558_i0 PRJNA312615 42709 187 1.478261 2.76434807 Methylobacterium durans 2202825 Bacteria Bacteria 97.8 1.71e-22   NR WP_109889183.1 2202825 g42558 i0 93.4 1.9572192513369 61 4 97.9 0 3 185 251 311 WP_109889183.1 sodium-dependent bicarbonate transport family permease [Methylobacterium durans] diamond 366 97.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium durans
11267447 11267447 PRJNA312615_P_NODE_9669_length_398_cov_2.512894_g9519_i0 PRJNA312615 9669 398 2.512894 10.00131812 Bradyrhizobium 374 Bacteria Bacteria 253 6.099999999999998e-82   NR WP_315586107.1 374 g9519 i0 100 0.994974874371859 132 0 99.5 0 397 2 83 214 WP_315586107.1 MULTISPECIES: chromate resistance protein ChrB domain-containing protein [Bradyrhizobium] diamond 396 253 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
11857259 11857259 PRJNA312615_P_NODE_52090_length_166_cov_2.564103_g51939_i0 PRJNA312615 52090 166 2.564103 4.25641098 Hansschlegelia zhihuaiae 405005 Bacteria Bacteria 96.3 1.78e-21   NR WP_128779072.1 405005 g51939 i0 89.1 0.993975903614458 55 6 99.4 0 1 165 455 509 WP_128779072.1 relaxase/mobilization nuclease domain-containing protein [Hansschlegelia zhihuaiae] diamond 165 96.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylopilaceae Hansschlegelia Hansschlegelia zhihuaiae
11857500 11857500 PRJNA312615_P_NODE_9670_length_398_cov_2.504298_g9520_i0 PRJNA312615 9670 398 2.504298 9.9671060399999991 Nitrobacter sp. NHB1 3119830 Bacteria Bacteria 254 2.35e-81   NR WP_335580448.1 3119830 g9520 i0 94.7 0.994974874371859 132 7 99.5 0 397 2 74 205 WP_335580448.1 plasmid partitioning protein RepA [Nitrobacter sp. NHB1] diamond 396 254 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Nitrobacter Nitrobacter sp. NHB1
12542475 12542475 PRJNA312615_P_NODE_39930_length_194_cov_1.406897_g39779_i0 PRJNA312615 39930 194 1.406897 2.72938018 Bradyrhizobium sp. 376 Bacteria Bacteria 121 1.43e-30   NR WP_409864162.1 376 g39779 i0 98.4 1.97938144329897 64 1 99 0 193 2 71 134 WP_409864162.1 Eco57I restriction-modification methylase domain-containing protein, partial [Bradyrhizobium sp.] diamond 384 121 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
12542598 12542598 PRJNA312615_P_NODE_51490_length_167_cov_0.864407_g51339_i0 PRJNA312615 51490 167 0.864407 1.44355969 Klebsiella variicola 244366 Bacteria Bacteria 98.6 1.29e-22   NR WP_229532556.1 244366 g51339 i0 89.1 3.95209580838323 55 6 98.8 0 3 167 323 377 WP_229532556.1 AAA family ATPase [Klebsiella variicola] diamond 660 98.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella variicola
13132117 13132117 PRJNA312615_P_NODE_41931_length_189_cov_1.400000_g41780_i0 PRJNA312615 41931 189 1.4 2.646 Bradyrhizobium 374 Bacteria Bacteria 117 1.26e-28   NR WP_024580190.1 374 g41780 i0 90.3 6.87301587301587 62 6 98.4 0 187 2 792 853 WP_024580190.1 MULTISPECIES: molybdopterin-dependent oxidoreductase [Bradyrhizobium] diamond 1299 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
13132152 13132152 PRJNA312615_P_NODE_43811_length_184_cov_2.266667_g43660_i0 PRJNA312615 43811 184 2.266667 4.17066728 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 116 2.84e-30   NR WP_298279871.1 199684 g43660 i0 100 0.994565217391304 61 0 99.5 0 184 2 111 171 WP_298279871.1 ABC transporter ATP-binding protein [uncultured Bradyrhizobium sp.] diamond 183 116 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
13132396 13132396 PRJNA312615_P_NODE_5511_length_515_cov_11.128755_g5363_i0 PRJNA312615 5511 515 11.128755 57.31308825 Pseudomonadota bacterium 1977087 Bacteria Bacteria 235 1.3799999999999999e-76   NR MEL6702562.1 1977087 g5363 i0 68.2 4.56116504854369 157 50 91.5 0 501 31 1 157 MEL6702562.1 30S ribosomal protein S17 [Pseudomonadota bacterium] diamond 2349 235 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
13132514 13132514 PRJNA312615_P_NODE_7151_length_458_cov_2.200489_g7001_i0 PRJNA312615 7151 458 2.200489 10.07823962 Bradyrhizobium 374 Bacteria Bacteria 304 1.2399999999999995e-99   NR WP_409867515.1 374 g7001 i0 100 0.995633187772926 152 0 99.6 0 456 1 257 408 WP_409867515.1 MULTISPECIES: chromate efflux transporter [Bradyrhizobium] diamond 456 304 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
13132550 13132550 PRJNA312615_P_NODE_8331_length_427_cov_1.682540_g8181_i0 PRJNA312615 8331 427 1.68254 7.1844458 root 1 Root_unresolved Root_unresolved 275 5.44e-87   NR WP_325323754.1 306 g8181 i0 91.4 110.156908665105 140 12 98.4 0 6 425 380 519 WP_325323754.1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, partial [Pseudomonas sp.] diamond 47037 276 0.996376811594203 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp.
13817289 13817289 PRJNA312615_P_NODE_30711_length_221_cov_0.889535_g30560_i0 PRJNA312615 30711 221 0.889535 1.96587235 Undibacterium luofuense 2828733 Bacteria Bacteria 145 4.77e-43   NR WP_212685933.1 2828733 g30560 i0 97.3 0.990950226244344 73 2 99.1 0 220 2 14 86 WP_212685933.1 response regulator [Undibacterium luofuense] diamond 219 145 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
14406809 14406809 PRJNA312615_P_NODE_17952_length_288_cov_2.041841_g17801_i0 PRJNA312615 17952 288 2.041841 5.88050208 Iodidimonas nitroreducens 1236968 Bacteria Bacteria 159 2.36e-44   NR WP_042088091.1 1236968 g17801 i0 78.9 0.989583333333333 95 20 99 0 286 2 49 143 WP_042088091.1 F0F1 ATP synthase subunit beta [Iodidimonas nitroreducens] diamond 285 159 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Iodidimonadales Iodidimonadaceae Iodidimonas Iodidimonas nitroreducens
14406932 14406932 PRJNA312615_P_NODE_23052_length_254_cov_1.273171_g22901_i0 PRJNA312615 23052 254 1.273171 3.23385434 Bradyrhizobium 374 Bacteria Bacteria 166 1.19e-47   NR WP_050629277.1 374 g22901 i0 96.4 0.992125984251969 84 3 99.2 0 253 2 299 382 WP_050629277.1 MULTISPECIES: ABC transporter substrate-binding protein [Bradyrhizobium] diamond 252 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
14406981 14406981 PRJNA312615_P_NODE_25612_length_242_cov_0.906736_g25461_i0 PRJNA312615 25612 242 0.906736 2.19430112 Undibacterium squillarum 1131567 Bacteria Bacteria 164 4.76e-45   NR WP_189357938.1 1131567 g25461 i0 100 0.991735537190083 80 0 99.2 0 2 241 804 883 WP_189357938.1 2-oxoglutarate dehydrogenase E1 component [Undibacterium squillarum] diamond 240 164 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
14407040 14407040 PRJNA312615_P_NODE_28592_length_229_cov_1.133333_g28441_i0 PRJNA312615 28592 229 1.133333 2.59533257 Bacteria 2 Bacteria Bacteria 140 4.79e-40   NR MDB6102186.1 1913989 g28441 i0 93.3 3.93013100436681 75 5 98.3 0 227 3 74 148 MDB6102186.1 hypothetical protein [Gammaproteobacteria bacterium] diamond 900 140 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
14407487 14407487 PRJNA312615_P_NODE_50112_length_169_cov_0.866667_g49961_i0 PRJNA312615 50112 169 0.866667 1.46466723 Pseudoxanthomonas taiwanensis 176598 Bacteria Bacteria 96.7 5.76e-24   NR WP_162124644.1 176598 g49961 i0 95.7 0.816568047337278 46 2 81.7 0 140 3 1 46 WP_162124644.1 DUF2752 domain-containing protein [Pseudoxanthomonas taiwanensis] diamond 138 96.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Pseudoxanthomonas Pseudoxanthomonas taiwanensis
14407496 14407496 PRJNA312615_P_NODE_50572_length_168_cov_0.873950_g50421_i0 PRJNA312615 50572 168 0.87395 1.468236 Pseudomonadota bacterium 1977087 Bacteria Bacteria 94.7 1.33e-21   NR MBS0416874.1 1977087 g50421 i0 83.6 2.94642857142857 55 9 98.2 0 167 3 19 73 MBS0416874.1 polyprenyl synthetase family protein [Pseudomonadota bacterium] diamond 495 94.7 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
14407617 14407617 PRJNA312615_P_NODE_58192_length_162_cov_0.902655_g58041_i0 PRJNA312615 58192 162 0.902655 1.4623011 Tepidimonas fonticaldi 1101373 Bacteria Bacteria 89 6.960000000000001e-21   NR WP_185974489.1 1101373 g58041 i0 100 0.759259259259259 41 0 75.9 0 40 162 73 113 WP_185974489.1 RidA family protein [Tepidimonas fonticaldi] diamond 123 89 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Tepidimonas Tepidimonas fonticaldi
14407712 14407712 PRJNA312615_P_NODE_832_length_1055_cov_2.108350_g747_i0 PRJNA312615 832 1055 2.10835 22.2430925 Bradyrhizobium 374 Bacteria Bacteria 456 5.339999999999998e-159   NR WP_315586137.1 374 g747 i0 100 0.656872037914692 231 0 65.7 0 361 1053 1 231 WP_315586137.1 MULTISPECIES: substrate-binding domain-containing protein [Bradyrhizobium] diamond 693 456 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
15091720 15091720 PRJNA312615_P_NODE_40912_length_191_cov_2.514085_g40761_i0 PRJNA312615 40912 191 2.514085 4.80190235 Methylobacterium sp. Leaf456 1736382 Bacteria Bacteria 115 3.35e-28   NR WP_056237790.1 1736382 g40761 i0 95.2 0.989528795811518 63 3 99 0 1 189 367 429 WP_056237790.1 ATP-binding cassette domain-containing protein [Methylobacterium sp. Leaf456] diamond 189 115 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf456
15091786 15091786 PRJNA312615_P_NODE_46272_length_178_cov_1.581395_g46121_i0 PRJNA312615 46272 178 1.581395 2.8148831 Methylobacterium sp. Leaf118 2876562 Bacteria Bacteria 71.6 8.94e-13   NR WP_232629378.1 2876562 g46121 i0 74 0.842696629213483 50 11 84.3 1 29 178 1 48 WP_232629378.1 glycosyltransferase family 4 protein [Methylobacterium sp. Leaf118] diamond 150 71.6 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf118
15680455 15680455 PRJNA312615_P_NODE_10193_length_388_cov_3.233038_g10043_i0 PRJNA312615 10193 388 3.233038 12.54418744 Bradyrhizobium 374 Bacteria Bacteria 231 9.1e-76   NR WP_172240210.1 374 g10043 i0 100 0.865979381443299 112 0 86.6 0 3 338 49 160 WP_172240210.1 MULTISPECIES: hypothetical protein [Bradyrhizobium] diamond 336 231 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
15681017 15681017 PRJNA312615_P_NODE_34333_length_209_cov_1.593750_g34182_i0 PRJNA312615 34333 209 1.59375 3.3309375 Methylorubrum rhodinum 29428 Bacteria Bacteria 122 2.9599999999999996e-32   NR WP_183568859.1 29428 g34182 i0 86.8 1.96650717703349 68 9 97.6 0 4 207 93 160 WP_183568859.1 class I SAM-dependent methyltransferase [Methylorubrum rhodinum] diamond 411 122 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
15681193 15681193 PRJNA312615_P_NODE_43153_length_186_cov_1.489051_g43002_i0 PRJNA312615 43153 186 1.489051 2.76963486 Sphingomonas echinoides 59803 Bacteria Bacteria 117 3.21e-30   NR WP_010407003.1 59803 g43002 i0 96.8 1 62 2 100 0 1 186 18 79 WP_010407003.1 FAD binding domain-containing protein [Sphingomonas echinoides] diamond 186 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas echinoides
15681352 15681352 PRJNA312615_P_NODE_51893_length_167_cov_0.864407_g51742_i0 PRJNA312615 51893 167 0.864407 1.44355969 Methylobacteriaceae 119045 Bacteria Bacteria 113 8.53e-28   NR WP_183563552.1 29428 g51742 i0 100 3.95209580838323 55 0 98.8 0 166 2 129 183 WP_183563552.1 DUF882 domain-containing protein [Methylorubrum rhodinum] diamond 660 113 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
16366358 16366358 PRJNA312615_P_NODE_31393_length_218_cov_1.556213_g31242_i0 PRJNA312615 31393 218 1.556213 3.39254434 Bradyrhizobium elkanii 29448 Bacteria Bacteria 67.8 3.81e-11   NR WP_244468633.1 29448 g31242 i0 60.9 0.880733944954128 64 24 88.1 1 194 3 63 125 WP_244468633.1 TRAP transporter substrate-binding protein [Bradyrhizobium elkanii] diamond 192 67.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium elkanii
16366728 16366728 PRJNA312615_P_NODE_8473_length_423_cov_9.831551_g8323_i0 PRJNA312615 8473 423 9.831551 41.58746073 Pseudomonadota bacterium 1977087 Bacteria Bacteria 187 2.1600000000000003e-58   NR MEL6702598.1 1977087 g8323 i0 67.9 2.91489361702128 137 43 97.2 1 413 3 1 136 MEL6702598.1 uL15 family ribosomal protein [Pseudomonadota bacterium] diamond 1233 187 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
16955353 16955353 PRJNA312615_P_NODE_21974_length_260_cov_1.630332_g21823_i0 PRJNA312615 21974 260 1.630332 4.2388632 Hyphomicrobiales 356 Bacteria Bacteria 180 1.2499999999999996e-52   NR WP_409864162.1 376 g21823 i0 100 2.97692307692308 86 0 99.2 0 258 1 386 471 WP_409864162.1 Eco57I restriction-modification methylase domain-containing protein, partial [Bradyrhizobium sp.] diamond 774 180 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
16955910 16955910 PRJNA312615_P_NODE_47374_length_175_cov_1.650794_g47223_i0 PRJNA312615 47374 175 1.650794 2.8888895 Undibacterium luofuense 2828733 Bacteria Bacteria 60.1 9.34e-9   NR WP_212686796.1 2828733 g47223 i0 84.4 0.548571428571429 32 5 54.9 0 174 79 265 296 WP_212686796.1 EamA family transporter RarD [Undibacterium luofuense] diamond 96 60.1 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium luofuense
17641425 17641425 PRJNA312615_P_NODE_23214_length_253_cov_1.500000_g23063_i0 PRJNA312615 23214 253 1.5 3.795 Bradyrhizobium 374 Bacteria Bacteria 166 4.72e-50   NR WP_315586168.1 374 g23063 i0 100 1.96837944664032 84 0 99.6 0 253 2 84 167 WP_315586168.1 MULTISPECIES: c-type cytochrome [Bradyrhizobium] diamond 498 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
17641836 17641836 PRJNA312615_P_NODE_6114_length_492_cov_2.753950_g5966_i0 PRJNA312615 6114 492 2.75395 13.549434 Pseudomonadota 1224 Bacteria Bacteria 152 1.4199999999999999e-42   NR WP_315586125.1 374 g5966 i0 100 0.914634146341463 75 0 45.7 0 226 2 1 75 WP_315586125.1 MULTISPECIES: ABC transporter ATP-binding protein [Bradyrhizobium] diamond 450 152 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
18229637 18229637 PRJNA312615_P_NODE_20435_length_269_cov_2.318182_g20284_i0 PRJNA312615 20435 269 2.318182 6.23590958 Bradyrhizobium 374 Bacteria Bacteria 159 7.749999999999999e-43   NR WP_315586041.1 374 g20284 i0 100 1.98513011152416 89 0 99.3 0 268 2 452 540 WP_315586041.1 MULTISPECIES: efflux RND transporter permease subunit [Bradyrhizobium] diamond 534 159 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
18229823 18229823 PRJNA312615_P_NODE_2815_length_681_cov_1.908228_g2684_i0 PRJNA312615 2815 681 1.908228 12.99503268 Bradyrhizobium 374 Bacteria Bacteria 417 3.3499999999999993e-143   NR WP_315586039.1 374 g2684 i0 100 0.995594713656388 226 0 99.6 0 680 3 137 362 WP_315586039.1 MULTISPECIES: MFS transporter [Bradyrhizobium] diamond 678 417 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
18229944 18229944 PRJNA312615_P_NODE_34055_length_210_cov_1.267081_g33904_i0 PRJNA312615 34055 210 1.267081 2.6608701 Bradyrhizobium 374 Bacteria Bacteria 135 3.12e-37   NR WP_024582003.1 374 g33904 i0 92.8 0.985714285714286 69 5 98.6 0 2 208 187 255 WP_024582003.1 MULTISPECIES: homoserine O-succinyltransferase [Bradyrhizobium] diamond 207 135 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
18230164 18230164 PRJNA312615_P_NODE_45255_length_181_cov_1.166667_g45104_i0 PRJNA312615 45255 181 1.166667 2.11166727 Methylorubrum 2282523 Bacteria Bacteria 111 3.14e-28   NR WP_183567193.1 29428 g45104 i0 91.7 1.98895027624309 60 5 99.4 0 181 2 79 138 WP_183567193.1 SDR family oxidoreductase [Methylorubrum rhodinum] diamond 360 111 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
18230179 18230179 PRJNA312615_P_NODE_45895_length_179_cov_1.569231_g45744_i0 PRJNA312615 45895 179 1.569231 2.80892349 Bradyrhizobium sp. Tv2a-2 113395 Bacteria Bacteria 106 6.79e-26   NR WP_024517179.1 113395 g45744 i0 89.8 0.988826815642458 59 6 98.9 0 178 2 66 124 WP_024517179.1 benzoate 1,2-dioxygenase electron transfer component BenC [Bradyrhizobium sp. Tv2a-2] diamond 177 106 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Tv2a-2
18230328 18230328 PRJNA312615_P_NODE_52375_length_166_cov_1.299145_g52224_i0 PRJNA312615 52375 166 1.299145 2.1565807 root 1 Root_unresolved Root_unresolved 75.1 5.11e-14   NR WP_114389886.1 1876515 g52224 i0 63.6 37.6626506024096 55 20 99.4 0 165 1 61 115 WP_114389886.1 F0F1 ATP synthase subunit alpha [Notoacmeibacter marinus] diamond 6252 75.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Notoacmeibacteraceae Notoacmeibacter Notoacmeibacter marinus
19503891 19503891 PRJNA312615_P_NODE_19436_length_276_cov_2.392070_g19285_i0 PRJNA312615 19436 276 2.39207 6.6021132 Burkholderiales bacterium 1891238 Bacteria Bacteria 83.6 2.26e-16   NR MBN9463344.1 1891238 g19285 i0 51.8 1.80434782608696 83 27 90.2 2 273 25 189 258 MBN9463344.1 TRZ/ATZ family hydrolase [Burkholderiales bacterium] diamond 498 83.6 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
19503939 19503939 PRJNA312615_P_NODE_21676_length_262_cov_1.145540_g21525_i0 PRJNA312615 21676 262 1.14554 3.0013148 Pseudomonas sp. 306 Bacteria Bacteria 153 1.6099999999999996e-43   NR WP_294335501.1 306 g21525 i0 87.4 0.99618320610687 87 11 99.6 0 1 261 163 249 WP_294335501.1 PDR/VanB family oxidoreductase [Pseudomonas sp.] diamond 261 153 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp.
19504458 19504458 PRJNA312615_P_NODE_45376_length_180_cov_6.755725_g45225_i0 PRJNA312615 45376 180 6.755725 12.160305 Bradyrhizobium 374 Bacteria Bacteria 117 1.2099999999999999e-32   NR WP_315586093.1 374 g45225 i0 100 0.983333333333333 59 0 98.3 0 178 2 21 79 WP_315586093.1 MULTISPECIES: putative entry exclusion protein TrbK-alt [Bradyrhizobium] diamond 177 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
19504703 19504703 PRJNA312615_P_NODE_58236_length_162_cov_0.902655_g58085_i0 PRJNA312615 58236 162 0.902655 1.4623011 Methylobacterium aerolatum 418708 Bacteria Bacteria 103 9.53e-25   NR WP_238201892.1 418708 g58085 i0 94.4 1 54 3 100 0 162 1 59 112 WP_238201892.1 dTDP-glucose 4,6-dehydratase [Methylobacterium aerolatum] diamond 162 103 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium aerolatum
19504838 19504838 PRJNA312615_P_NODE_9976_length_392_cov_1.883382_g9826_i0 PRJNA312615 9976 392 1.883382 7.38285744 Klebsiella pneumoniae 573 Bacteria Bacteria 268 1.25e-89   NR WP_136697924.1 573 g9826 i0 100 0.994897959183674 130 0 99.5 0 391 2 57 186 WP_136697924.1 ArdC family protein, partial [Klebsiella pneumoniae] diamond 390 268 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
20190304 20190304 PRJNA312615_P_NODE_676_length_1143_cov_2.834552_g600_i0 PRJNA312615 676 1143 2.834552 32.39892936 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 414 5.55e-143   NR WP_366946378.1 199684 g600 i0 94.7 0.545931758530184 208 11 54.6 0 1112 489 1 208 WP_366946378.1 RES family NAD+ phosphorylase [uncultured Bradyrhizobium sp.] diamond 624 414 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
20779371 20779371 PRJNA312615_P_NODE_16717_length_300_cov_1.426295_g16566_i0 PRJNA312615 16717 300 1.426295 4.278885 Bradyrhizobium uaiense 2594946 Bacteria Bacteria 112 1.38e-26   NR WP_163150668.1 2594946 g16566 i0 80.6 0.67 67 13 67 0 203 3 452 518 WP_163150668.1 hypothetical protein [Bradyrhizobium uaiense] diamond 201 112 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium uaiense
20779621 20779621 PRJNA312615_P_NODE_2697_length_693_cov_1.989130_g2568_i0 PRJNA312615 2697 693 1.98913 13.7846709 Bradyrhizobium sp. 376 Bacteria Bacteria 291 1.3199999999999996e-96   NR MFN5714718.1 376 g2568 i0 100 1.30735930735931 151 0 65.4 0 453 1 1 151 MFN5714718.1 DnaB-like helicase N-terminal domain-containing protein [Bradyrhizobium sp.] diamond 906 291 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
20780141 20780141 PRJNA312615_P_NODE_52197_length_166_cov_1.743590_g52046_i0 PRJNA312615 52197 166 1.74359 2.8943594 unclassified Mesorhizobium 325217 Bacteria Bacteria 115 1.1e-29   NR WP_292582160.1 325217 g52046 i0 94.5 0.993975903614458 55 3 99.4 0 2 166 177 231 WP_292582160.1 MULTISPECIES: cytochrome c [unclassified Mesorhizobium] diamond 165 115 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium  
20780191 20780191 PRJNA312615_P_NODE_54737_length_164_cov_1.773913_g54586_i0 PRJNA312615 54737 164 1.773913 2.90921732 Bacteria 2 Bacteria Bacteria 103 3.5e-24   NR MBV9697919.1 1913989 g54586 i0 88.9 1.97560975609756 54 6 98.8 0 164 3 540 593 MBV9697919.1 efflux RND transporter permease subunit [Gammaproteobacteria bacterium] diamond 324 104 0.990384615384615 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
20780195 20780195 PRJNA312615_P_NODE_54917_length_164_cov_1.113043_g54766_i0 PRJNA312615 54917 164 1.113043 1.82539052 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 113 5.08e-30   NR WP_100955801.1 2057741 g54766 i0 98.1 0.969512195121951 53 1 97 0 162 4 33 85 WP_100955801.1 NYN domain-containing protein [Bradyrhizobium sp. SK17] diamond 159 113 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
21465838 21465838 PRJNA312615_P_NODE_50957_length_167_cov_1.728814_g50806_i0 PRJNA312615 50957 167 1.728814 2.88711938 Steroidobacteraceae bacterium 2689616 Bacteria Bacteria 117 3.82e-29   NR HEY2404004.1 2689616 g50806 i0 100 1.97604790419162 55 0 98.8 0 165 1 208 262 HEY2404004.1 KUP/HAK/KT family potassium transporter [Steroidobacteraceae bacterium] diamond 330 117 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Steroidobacterales Steroidobacteraceae   Steroidobacteraceae bacterium
22054655 22054655 PRJNA312615_P_NODE_27838_length_232_cov_0.868852_g27687_i0 PRJNA312615 27838 232 0.868852 2.01573664 Bradyrhizobium denitrificans 2734912 Bacteria Bacteria 135 2.7899999999999997e-35   NR WP_211400778.1 2734912 g27687 i0 98.7 0.995689655172414 77 1 99.6 0 232 2 507 583 WP_211400778.1 ABC transporter ATP-binding protein [Bradyrhizobium denitrificans] diamond 231 135 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium denitrificans
22054693 22054693 PRJNA312615_P_NODE_29958_length_223_cov_2.356322_g29807_i0 PRJNA312615 29958 223 2.356322 5.25459806 Bradyrhizobium sp. 376 Bacteria Bacteria 154 3.08e-42   NR WP_298362392.1 376 g29807 i0 98.6 0.995515695067265 74 1 99.6 0 2 223 355 428 WP_298362392.1 flavin-containing monooxygenase [Bradyrhizobium sp.] diamond 222 154 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
22055088 22055088 PRJNA312615_P_NODE_50098_length_169_cov_0.866667_g49947_i0 PRJNA312615 50098 169 0.866667 1.46466723 Zoogloea 349 Bacteria Bacteria 102 3e-25   NR MBP6802294.1 49181 g49947 i0 91.1 3.97633136094675 56 5 99.4 0 2 169 42 97 MBP6802294.1 phosphoenolpyruvate--protein phosphotransferase [Zoogloea sp.] diamond 672 102 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Zoogloeaceae Zoogloea Zoogloea sp.
22055240 22055240 PRJNA312615_P_NODE_58118_length_162_cov_0.902655_g57967_i0 PRJNA312615 58118 162 0.902655 1.4623011 Methylorubrum suomiense 144191 Bacteria Bacteria 94.4 8.050000000000001e-21   NR WP_238308174.1 144191 g57967 i0 90.4 1.92592592592593 52 5 96.3 0 160 5 548 599 WP_238308174.1 EAL domain-containing protein [Methylorubrum suomiense] diamond 312 94.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum suomiense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;