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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA312615" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJNA312615 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
378178 378178 PRJNA312615_P_NODE_31701_length_217_cov_1.791667_g31550_i0 PRJNA312615 31701 217 1.791667 3.88791739 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87 3.35e-19   NR XP_004341067.1 1257118 g31550 i0 74.5 2.88940092165899 51 13 70.5 0 216 64 148 198 XP_004341067.1 peptidylprolyl cis-trans isomerase, cyclophilin-type, putative [Acanthamoeba castellanii str. Neff] diamond 627 87 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16955554 16955554 PRJNA312615_P_NODE_30374_length_222_cov_1.179191_g30223_i0 PRJNA312615 30374 222 1.179191 2.61780402 Cavenderia deminutiva 361123 Evosea other_Eukaryota 95.1 1.02e-20   NR AOE43274.1 361123 g30223 i0 57.7 3.83783783783784 71 30 95.9 0 215 3 397 467 AOE43274.1 aconitate [Cavenderia deminutiva] diamond 852 95.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia deminutiva
19503970 19503970 PRJNA312615_P_NODE_23036_length_254_cov_1.458537_g22885_i0 PRJNA312615 23036 254 1.458537 3.70468398 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62.8 3.63e-9   NR XP_004334520.1 1257118 g22885 i0 60.7 0.661417322834646 56 15 63.8 2 164 3 31 81 XP_004334520.1 CMF receptor CMFR1, putative [Acanthamoeba castellanii str. Neff] diamond 168 62.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26694329 26694329 PRJNA312615_P_NODE_21021_length_266_cov_1.175115_g20870_i0 PRJNA312615 21021 266 1.175115 3.1258059 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 172 1.86e-47   NR KAH3764451.1 1580589 g20870 i0 86.4 6.8796992481203 88 12 99.2 0 265 2 108 195 KAH3764451.1 alanine--tRNA ligase [Pelomyxa schiedti] diamond 1830 172 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26694333 26694333 PRJNA312615_P_NODE_40221_length_193_cov_1.770833_g40070_i0 PRJNA312615 40221 193 1.770833 3.41770769 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 55.5 8.12e-8   NR KAH3743229.1 1580589 g40070 i0 41.7 2.7979274611399 60 35 93.3 0 181 2 58 117 KAH3743229.1 autophagy protein 8 [Pelomyxa schiedti] diamond 540 55.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26821266 26821266 PRJNA312615_P_NODE_28961_length_227_cov_2.106742_g28810_i0 PRJNA312615 28961 227 2.106742 4.78230434 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 114 2.68e-27   NR PRP87432.1 1890364 g28810 i0 69.4 0.951541850220264 72 20 92.5 1 8 217 1729 1800 PRP87432.1 counting factor associated protein [Planoprotostelium fungivorum] diamond 216 114 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27105702 27105702 PRJNA312615_P_NODE_762_length_1089_cov_4.362500_g678_i0 PRJNA312615 762 1089 4.3625 47.507625 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 288 6.75e-93   NR XP_004367664.1 1257118 g678 i0 52.7 0.705234159779614 256 116 69.4 3 19 774 12 266 XP_004367664.1 phytanoylCoA dioxygenase [Acanthamoeba castellanii str. Neff] diamond 768 288 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27232266 27232266 PRJNA312615_P_NODE_37143_length_201_cov_2.342105_g36992_i0 PRJNA312615 37143 201 2.342105 4.70763105 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 79.7 7.46e-16   NR KAH3732769.1 1580589 g36992 i0 58.7 0.940298507462687 63 26 94 0 196 8 88 150 KAH3732769.1 actin bundling protein [Pelomyxa schiedti] diamond 189 79.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27295521 27295521 PRJNA312615_P_NODE_23203_length_253_cov_1.617647_g23052_i0 PRJNA312615 23203 253 1.617647 4.09264691 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.6 5.98e-13   NR XP_004337827.1 1257118 g23052 i0 53.2 0.936758893280632 79 35 92.5 2 241 8 595 672 XP_004337827.1 acylCoA synthetase, putative [Acanthamoeba castellanii str. Neff] diamond 237 73.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27358899 27358899 PRJNA312615_P_NODE_20803_length_267_cov_1.811927_g20652_i0 PRJNA312615 20803 267 1.811927 4.83784509 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 122 1.52e-30   NR XP_004334520.1 1257118 g20652 i0 61.8 1 89 34 100 0 267 1 274 362 XP_004334520.1 CMF receptor CMFR1, putative [Acanthamoeba castellanii str. Neff] diamond 267 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27516646 27516646 PRJNA312615_P_NODE_47183_length_176_cov_1.204724_g47032_i0 PRJNA312615 47183 176 1.204724 2.12031424 Polysphondylium violaceum 133409 Evosea other_Eukaryota 48.9 9.98e-5   NR KAF2068738.1 133409 g47032 i0 87.5 0.818181818181818 24 3 40.9 0 2 73 399 422 KAF2068738.1 hypothetical protein CYY_009942 [Polysphondylium violaceum] diamond 144 48.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27643121 27643121 PRJNA312615_P_NODE_34884_length_208_cov_0.849057_g34733_i0 PRJNA312615 34884 208 0.849057 1.76603856 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 50.4 4.67e-5   NR KAH3743879.1 1580589 g34733 i0 48 1.3125 50 26 72.1 0 53 202 2015 2064 KAH3743879.1 E3 ubiquitin-protein ligase RNF213 [Pelomyxa schiedti] diamond 273 50.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28007975 28007975 PRJNA312615_P_NODE_25825_length_241_cov_0.984375_g25674_i0 PRJNA312615 25825 241 0.984375 2.37234375 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.1 2.76e-8   NR XP_003288594.1 5786 g25674 i0 38.7 6.31120331950207 75 44 90.9 2 23 241 91 165 XP_003288594.1 uncharacterized protein DICPUDRAFT_48007 [Dictyostelium purpureum] diamond 1521 60.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28134245 28134245 PRJNA312615_P_NODE_29205_length_226_cov_2.000000_g29054_i0 PRJNA312615 29205 226 2 4.52 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.1 6.929999999999999e-23   NR ABD46563.1 5778 g29054 i0 52 5.73451327433628 75 36 99.6 0 2 226 70 144 ABD46563.1 succinyl-diaminopimelate desuccinylase-like protein A, partial [Vermamoeba vermiformis] diamond 1296 97.1 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
28148240 28148240 PRJNA312615_P_NODE_21105_length_265_cov_1.888889_g20954_i0 PRJNA312615 21105 265 1.888889 5.00555585 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 46.2 0.00298   NR KAH3746249.1 1580589 g20954 i0 40 1.64150943396226 45 27 50.9 0 1 135 115 159 KAH3746249.1 hypothetical protein Pelo_12332 [Pelomyxa schiedti] diamond 435 46.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28165731 28165731 PRJNA312615_P_NODE_15765_length_310_cov_1.241379_g15614_i0 PRJNA312615 15765 310 1.241379 3.8482749 Dictyosteliaceae 2058185 Evosea other_Eukaryota 97.8 3.9800000000000006e-21   NR XP_003284166.1 5786 g15614 i0 51.7 1.72258064516129 89 43 86.1 0 268 2 344 432 XP_003284166.1 uncharacterized protein DICPUDRAFT_45258 [Dictyostelium purpureum] diamond 534 97.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28369057 28369057 PRJNA312615_P_NODE_24726_length_246_cov_1.035533_g24575_i0 PRJNA312615 24726 246 1.035533 2.54741118 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 70.5 6.93e-12   NR PRP79726.1 1890364 g24575 i0 42 1.95121951219512 81 44 98.8 1 243 1 2566 2643 PRP79726.1 hypothetical protein PROFUN_12660 [Planoprotostelium fungivorum] diamond 480 70.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28621865 28621865 PRJNA312615_P_NODE_36587_length_203_cov_1.324675_g36436_i0 PRJNA312615 36587 203 1.324675 2.68909025 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 42.7 0.0227   NR PRP88705.1 1890364 g36436 i0 41.7 1.41871921182266 48 28 70.9 0 5 148 1161 1208 PRP88705.1 hypothetical protein PROFUN_02801 [Planoprotostelium fungivorum] diamond 288 42.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28685062 28685062 PRJNA312615_P_NODE_41947_length_189_cov_1.350000_g41796_i0 PRJNA312615 41947 189 1.35 2.5515 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 55.8 4.24e-7   NR XP_644604.1 352472 g41796 i0 45 0.952380952380952 60 33 95.2 0 9 188 344 403 XP_644604.1 ankyrin repeat-containing protein [Dictyostelium discoideum AX4] diamond 180 55.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
28810801 28810801 PRJNA312615_P_NODE_36828_length_202_cov_1.973856_g36677_i0 PRJNA312615 36828 202 1.973856 3.98718912 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 44.3 0.00639   NR PRP80875.1 1890364 g36677 i0 37.3 0.995049504950495 67 39 99.5 1 201 1 716 779 PRP80875.1 Kinesin-like protein KIF9 [Planoprotostelium fungivorum] diamond 201 44.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29221814 29221814 PRJNA312615_P_NODE_22269_length_258_cov_2.550239_g22118_i0 PRJNA312615 22269 258 2.550239 6.57961662 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 78.2 1.41e-14   NR KYR01252.1 361077 g22118 i0 76.2 1.37209302325581 42 10 48.8 0 133 258 200 241 KYR01252.1 cathepsin Z precursor [Tieghemostelium lacteum] diamond 354 78.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29631796 29631796 PRJNA312615_P_NODE_27570_length_233_cov_1.108696_g27419_i0 PRJNA312615 27570 233 1.108696 2.58326168 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 57 3.01e-8   NR XP_012755846.1 1410327 g27419 i0 42.3 0.669527896995708 52 28 67 1 77 232 2 51 XP_012755846.1 hypothetical protein SAMD00019534_038860, partial [Acytostelium subglobosum LB1] diamond 156 57 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29694901 29694901 PRJNA312615_P_NODE_18190_length_286_cov_1.704641_g18039_i0 PRJNA312615 18190 286 1.704641 4.87527326 Polysphondylium violaceum 133409 Evosea other_Eukaryota 135 1.56e-34   NR KAF2075779.1 133409 g18039 i0 69.9 0.975524475524476 93 28 97.6 0 284 6 688 780 KAF2075779.1 hypothetical protein CYY_002912 [Polysphondylium violaceum] diamond 279 135 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29839054 29839054 PRJNA312615_P_NODE_42811_length_187_cov_1.260870_g42660_i0 PRJNA312615 42811 187 1.26087 2.3578269 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.5 5.92e-7   NR KAF2073305.1 133409 g42660 i0 42.1 3.59358288770053 57 33 91.4 0 2 172 5069 5125 KAF2073305.1 hypothetical protein CYY_005382 [Polysphondylium violaceum] diamond 672 55.8 0.99462365591397806 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
31528103 31528103 PRJNA312615_P_NODE_21876_length_261_cov_0.962264_g21725_i0 PRJNA312615 21876 261 0.962264 2.51150904 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 125 8.100000000000001e-34   NR PRP83484.1 1890364 g21725 i0 70 1.83908045977011 80 24 92 0 256 17 149 228 PRP83484.1 spg1, Ras superfamily GTPase [Planoprotostelium fungivorum] diamond 480 125 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31591451 31591451 PRJNA312615_P_NODE_49856_length_169_cov_1.158333_g49705_i0 PRJNA312615 49856 169 1.158333 1.95758277 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 62.8 1.13e-9   NR XP_004259455.1 370355 g49705 i0 53.8 0.923076923076923 52 24 92.3 0 158 3 453 504 XP_004259455.1 T-complex protein 1 subunit epsilon, putative [Entamoeba invadens IP1] diamond 156 62.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
32129259 32129259 PRJNA312615_P_NODE_43698_length_185_cov_1.125000_g43547_i0 PRJNA312615 43698 185 1.125 2.08125 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 79.7 7.97e-18   NR XP_012752478.1 1410327 g43547 i0 66 5.33513513513514 53 18 85.9 0 185 27 29 81 XP_012752478.1 hypothetical protein SAMD00019534_079840, partial [Acytostelium subglobosum LB1] diamond 987 79.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
32224084 32224084 PRJNA312615_P_NODE_55758_length_164_cov_0.886957_g55607_i0 PRJNA312615 55758 164 0.886957 1.45460948 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 48.5 2.77e-5   NR XP_646433.1 352472 g55607 i0 61.3 0.567073170731707 31 12 56.7 0 97 5 54 84 XP_646433.1 cytochrome c oxidase subunit V [Dictyostelium discoideum AX4] diamond 93 48.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
32256009 32256009 PRJNA312615_P_NODE_27358_length_234_cov_0.810811_g27207_i0 PRJNA312615 27358 234 0.810811 1.89729774 Synstelium polycarpum 361085 Evosea other_Eukaryota 79.7 3.15e-15   NR AOE43239.1 361085 g27207 i0 56.9 3.46153846153846 65 28 83.3 0 196 2 847 911 AOE43239.1 RNA polymerase I [Synstelium polycarpum] diamond 810 79.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa     Synstelium Synstelium polycarpum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;