RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA312107" and tax_phylum = "Candidatus Woeseibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA312107 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28400709 28400709 PRJNA312107_P_NODE_25606_length_162_cov_0.920354_g25440_i0 PRJNA312107 25606 162 0.920354 1.49097348 Candidatus Woesebacteria bacterium GW2 2026804 Bacteria Bacteria 68.9 7.53e-13   NR KKS77905.1 1618584 g25440 i0 67.5 2.92592592592593 40 13 74.1 0 160 41 124 163 KKS77905.1 MAG: NDP-hexose 4-ketoreductase UrdR [Candidatus Woesebacteria bacterium GW2011_GWC1_42_9] diamond 474 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWC1_42_9
29190190 29190190 PRJNA312107_P_NODE_18069_length_171_cov_1.704918_g17903_i0 PRJNA312107 18069 171 1.704918 2.91540978 Candidatus Woesebacteria bacterium GW2 2026804 Bacteria Bacteria 66.2 2.14e-11   NR KKU10801.1 1618581 g17903 i0 55.1 0.859649122807018 49 22 86 0 14 160 137 185 KKU10801.1 MAG: hypothetical protein UX13_C0003G0013 [Candidatus Woesebacteria bacterium GW2011_GWB1_45_5] diamond 147 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWB1_45_5
31054011 31054011 PRJNA312107_P_NODE_26275_length_162_cov_0.920354_g26109_i0 PRJNA312107 26275 162 0.920354 1.49097348 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 48.5 1.11e-4   NR MBP6045257.1 2026804 g26109 i0 45.2 1.14814814814815 62 24 96.3 2 157 2 448 509 MBP6045257.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 186 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;