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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA312107" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312107 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26648460 26648460 PRJNA312107_P_NODE_18961_length_169_cov_0.866667_g18795_i0 PRJNA312107 18961 169 0.866667 1.46466723 Bdellovibrio 958 Bacteria Bacteria 91.7 6.13e-20   NR MBC7465026.1 28201 g18795 i0 75 4.97041420118343 56 14 99.4 0 169 2 269 324 MBC7465026.1 DEAD/DEAH box helicase [Bdellovibrio sp.] diamond 840 91.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
26694325 26694325 PRJNA312107_P_NODE_24961_length_163_cov_0.912281_g24795_i0 PRJNA312107 24961 163 0.912281 1.48701803 Halobacteriovoraceae bacterium 2026745 Bacteria Bacteria 48.5 7.61e-6   NR MAX65654.1 2026745 g24795 i0 46.8 2.61349693251534 47 25 86.5 0 143 3 3 49 MAX65654.1 50S ribosomal protein L29 [Halobacteriovoraceae bacterium] diamond 426 48.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae   Halobacteriovoraceae bacterium
26884573 26884573 PRJNA312107_P_NODE_23121_length_165_cov_0.896552_g22955_i0 PRJNA312107 23121 165 0.896552 1.4793108 Oligoflexus sp. 1971216 Bacteria Bacteria 112 3.7100000000000005e-27   NR WP_325143496.1 1971216 g22955 i0 100 0.963636363636364 53 0 96.4 0 161 3 449 501 WP_325143496.1 replication restart helicase PriA [Oligoflexus sp.] diamond 159 112 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
27042647 27042647 PRJNA312107_P_NODE_25682_length_162_cov_0.920354_g25516_i0 PRJNA312107 25682 162 0.920354 1.49097348 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 50.1 3.17e-5   NR MBL7716680.1 2053517 g25516 i0 47.1 0.944444444444444 51 27 94.4 0 161 9 391 441 MBL7716680.1 hypothetical protein [Bdellovibrionales bacterium] diamond 153 50.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27168851 27168851 PRJNA312107_P_NODE_20802_length_167_cov_0.881356_g20636_i0 PRJNA312107 20802 167 0.881356 1.47186452 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 80.1 2.56e-16   NR HPI40480.1 2026715 g20636 i0 72.7 0.988023952095808 55 15 98.8 0 165 1 58 112 HPI40480.1 peptidylprolyl isomerase [Pseudobdellovibrionaceae bacterium] diamond 165 80.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
27249864 27249864 PRJNA312107_P_NODE_19443_length_168_cov_1.428571_g19277_i0 PRJNA312107 19443 168 1.428571 2.39999928 Bacteria 2 Bacteria Bacteria 72.4 4.04e-13   NR MCO5143756.1 2599941 g19277 i0 79.1 1.53571428571429 43 9 76.8 0 131 3 319 361 MCO5143756.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [Oligoflexia bacterium] diamond 258 72.4 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
27674706 27674706 PRJNA312107_P_NODE_22484_length_165_cov_0.896552_g22318_i0 PRJNA312107 22484 165 0.896552 1.4793108 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 64.7 2.24e-10   NR PZQ44255.1 349221 g22318 i0 59.3 0.981818181818182 54 22 98.2 0 3 164 224 277 PZQ44255.1 MAG: UDP-N-acetylmuramate--alanine ligase [Micavibrio aeruginosavorus] diamond 162 64.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
27737975 27737975 PRJNA312107_P_NODE_20064_length_168_cov_0.873950_g19898_i0 PRJNA312107 20064 168 0.87395 1.468236 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 100 5.449999999999999e-23   NR NOT80326.1 2081706 g19898 i0 85.2 0.964285714285714 54 8 96.4 0 3 164 240 293 NOT80326.1 potassium-transporting ATPase subunit KdpA [Bacteriovoracaceae bacterium] diamond 162 100 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29554746 29554746 PRJNA312107_P_NODE_24230_length_164_cov_0.895652_g24064_i0 PRJNA312107 24230 164 0.895652 1.46886928 Bdellovibrionota 3018035 Bacteria Bacteria 78.2 6.24e-16   NR HEX4923610.1 2053517 g24064 i0 64.8 2.96341463414634 54 19 98.8 0 162 1 47 100 HEX4923610.1 MotA/TolQ/ExbB proton channel family protein [Bdellovibrionales bacterium] diamond 486 78.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29789798 29789798 PRJNA312107_P_NODE_21451_length_166_cov_0.888889_g21285_i0 PRJNA312107 21451 166 0.888889 1.47555574 Bdellovibrionales bacterium RIFOXYC1_FULL_54_43 1797397 Bacteria Bacteria 97.4 5.04e-23   NR OFZ52880.1 1797397 g21285 i0 87 0.975903614457831 54 7 97.6 0 163 2 1 54 OFZ52880.1 MAG: flagellar basal-body rod protein FlgG [Bdellovibrionales bacterium RIFOXYC1_FULL_54_43] diamond 162 97.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFOXYC1_FULL_54_43
29979460 29979460 PRJNA312107_P_NODE_23231_length_165_cov_0.896552_g23065_i0 PRJNA312107 23231 165 0.896552 1.4793108 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 108 6.13e-26   NR MBX3021641.1 2053517 g23065 i0 94.4 2.94545454545455 54 3 98.2 0 164 3 350 403 MBX3021641.1 DNA-directed RNA polymerase subunit beta [Bdellovibrionales bacterium] diamond 486 108 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30042621 30042621 PRJNA312107_P_NODE_26291_length_162_cov_0.920354_g26125_i0 PRJNA312107 26291 162 0.920354 1.49097348 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 41.2 0.0418   NR NUM88476.1 2053517 g26125 i0 41 0.722222222222222 39 23 72.2 0 145 29 102 140 NUM88476.1 glycosyltransferase [Bdellovibrionales bacterium] diamond 117 41.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30264130 30264130 PRJNA312107_P_NODE_18952_length_169_cov_0.866667_g18786_i0 PRJNA312107 18952 169 0.866667 1.46466723 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 80.5 1.94e-16   NR MEO5669010.1 3034175 g18786 i0 76.1 0.816568047337278 46 11 81.7 0 25 162 37 82 MEO5669010.1 1-acyl-sn-glycerol-3-phosphate acyltransferase [Bdellovibrionota bacterium] diamond 138 80.5 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30628719 30628719 PRJNA312107_P_NODE_19053_length_169_cov_0.866667_g18887_i0 PRJNA312107 19053 169 0.866667 1.46466723 Bdellovibrionota 3018035 Bacteria Bacteria 91.3 1.04e-19   NR MCB0407548.1 2053517 g18887 i0 73.2 2.98224852071006 56 15 99.4 0 1 168 218 273 MCB0407548.1 acyl-CoA dehydrogenase [Bdellovibrionales bacterium] diamond 504 91.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30959022 30959022 PRJNA312107_P_NODE_21454_length_166_cov_0.888889_g21288_i0 PRJNA312107 21454 166 0.888889 1.47555574 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 66.6 4.95e-11   NR MES2855834.1 3034175 g21288 i0 54.7 0.957831325301205 53 24 95.8 0 7 165 488 540 MES2855834.1 DUF3857 domain-containing protein [Bdellovibrionota bacterium] diamond 159 66.6 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31008127 31008127 PRJNA312107_P_NODE_25834_length_162_cov_0.920354_g25668_i0 PRJNA312107 25834 162 0.920354 1.49097348 Bdellovibrio 958 Bacteria Bacteria 73.9 1.02e-13   NR WP_061835465.1 959 g25668 i0 61.1 3.01851851851852 54 21 100 0 1 162 149 202 WP_061835465.1 cyclic nucleotide-binding domain-containing protein [Bdellovibrio bacteriovorus] diamond 489 73.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
31717779 31717779 PRJNA312107_P_NODE_21157_length_167_cov_0.881356_g20991_i0 PRJNA312107 21157 167 0.881356 1.47186452 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 78.2 3.82e-15   NR MEK6706183.1 3034175 g20991 i0 59.3 0.970059880239521 54 22 97 0 3 164 142 195 MEK6706183.1 MFS transporter [Bdellovibrionota bacterium] diamond 162 78.2 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31875775 31875775 PRJNA312107_P_NODE_23657_length_164_cov_0.904348_g23491_i0 PRJNA312107 23657 164 0.904348 1.48313072 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 56.2 7.27e-8   NR MCM2351162.1 2081706 g23491 i0 51.9 0.98780487804878 54 26 98.8 0 164 3 79 132 MCM2351162.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 162 56.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
32494872 32494872 PRJNA312107_P_NODE_19739_length_168_cov_0.873950_g19573_i0 PRJNA312107 19739 168 0.87395 1.468236 Bdellovibrionota 3018035 Bacteria Bacteria 107 5.190000000000001e-27   NR MBA2405567.1 2053517 g19573 i0 85.7 3 56 8 100 0 1 168 116 171 MBA2405567.1 type I methionyl aminopeptidase [Bdellovibrionales bacterium] diamond 504 108 0.990740740740741 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32572211 32572211 PRJNA312107_P_NODE_22959_length_165_cov_0.896552_g22793_i0 PRJNA312107 22959 165 0.896552 1.4793108 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 93.2 1.83e-22   NR MEK6628179.1 3034175 g22793 i0 72.7 1 55 15 100 0 165 1 13 67 MEK6628179.1 EVE domain-containing protein [Bdellovibrionota bacterium] diamond 165 93.2 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;