RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA312107" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA312107 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27074223 27074223 PRJNA312107_P_NODE_20142_length_168_cov_0.873950_g19976_i0 PRJNA312107 20142 168 0.87395 1.468236 Malassezia furfur 55194 Fungi Fungi 63.9 4.53e-10   NR KAI3626632.1 55194 g19976 i0 55.4 2 56 25 100 0 1 168 213 268 KAI3626632.1 hypothetical protein CBS14141_000633 [Malassezia furfur] diamond 336 63.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
30769437 30769437 PRJNA312107_P_NODE_23614_length_164_cov_0.904348_g23448_i0 PRJNA312107 23614 164 0.904348 1.48313072 Tilletia indica 43049 Fungi Fungi 52.8 3.66e-6   NR KAE8239739.1 43049 g23448 i0 60 5.72560975609756 35 14 64 0 164 60 326 360 KAE8239739.1 hypothetical protein A4X13_0g8091 [Tilletia indica] diamond 939 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Tilletiales Tilletiaceae Tilletia Tilletia indica
32097360 32097360 PRJNA312107_P_NODE_20158_length_168_cov_0.873950_g19992_i0 PRJNA312107 20158 168 0.87395 1.468236 Sphaerobolus stellatus SS14 990650 Fungi Fungi 73.2 1.09e-14   NR KIJ29806.1 990650 g19992 i0 70.9 1.89285714285714 55 16 98.2 0 167 3 41 95 KIJ29806.1 hypothetical protein M422DRAFT_128484, partial [Sphaerobolus stellatus SS14] diamond 318 73.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Geastrales Sphaerobolaceae Sphaerobolus Sphaerobolus stellatus
32666394 32666394 PRJNA312107_P_NODE_19780_length_168_cov_0.873950_g19614_i0 PRJNA312107 19780 168 0.87395 1.468236 Malassezia vespertilionis 2020962 Fungi Fungi 65.5 1.37e-11   NR PKI83286.1 2020962 g19614 i0 68.5 0.964285714285714 54 17 96.4 0 167 6 78 131 PKI83286.1 hypothetical protein MVES_003040 [Malassezia vespertilionis] diamond 162 65.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia vespertilionis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;