contig_metadata
48 rows where analysis = "diamond", bioproject = "PRJNA309466" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15679479 | 15679479 | PRJNA309466_P_NODE_10093_length_199_cov_1.326667_g10036_i0 | PRJNA309466 | 10093 | 199 | 1.326667 | 2.64006733 | Alloalcanivorax xenomutans | 1094342 | Bacteria | Bacteria | 70.5 | 3.37e-12 | NR | WP_284456197.1 | 1094342 | g10036 | i0 | 49.2 | 0.949748743718593 | 63 | 32 | 95 | 0 | 1 | 189 | 339 | 401 | WP_284456197.1 hypothetical protein [Alloalcanivorax xenomutans] | diamond | 189 | 70.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Alcanivoracaceae | Alloalcanivorax | Alloalcanivorax xenomutans | ||
| 20778292 | 20778292 | PRJNA309466_P_NODE_11397_length_190_cov_1.453901_g11340_i0 | PRJNA309466 | 11397 | 190 | 1.453901 | 2.7624119 | Bacteria | 2 | Bacteria | Bacteria | 114 | 4.72e-30 | NR | OGT89581.1 | 1798308 | g11340 | i0 | 85.5 | 12.7263157894737 | 62 | 9 | 97.9 | 0 | 2 | 187 | 102 | 163 | OGT89581.1 MAG: elongation factor P [Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37] | diamond | 2418 | 114 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37 | |||||
| 26599100 | 26599100 | PRJNA309466_P_NODE_17981_length_162_cov_2.230088_g17924_i0 | PRJNA309466 | 17981 | 162 | 2.230088 | 3.61274256 | Sphingomonadales bacterium | 1978525 | Bacteria | Bacteria | 43.9 | 0.00496 | NR | MBM3939234.1 | 1978525 | g17924 | i0 | 71.4 | 1.05555555555556 | 28 | 8 | 51.9 | 0 | 153 | 70 | 313 | 340 | MBM3939234.1 glycosyltransferase [Sphingomonadales bacterium] | diamond | 171 | 43.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadales bacterium | ||||
| 26789533 | 26789533 | PRJNA309466_P_NODE_8821_length_208_cov_4.377358_g8764_i0 | PRJNA309466 | 8821 | 208 | 4.377358 | 9.10490464 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 64.7 | 8.91e-12 | NR | WP_219553161.1 | 573 | g8764 | i0 | 56.7 | 2.52403846153846 | 60 | 25 | 86.5 | 1 | 3 | 182 | 19 | 77 | WP_219553161.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 525 | 65.1 | 0.993855606758833 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 26821251 | 26821251 | PRJNA309466_P_NODE_8841_length_208_cov_2.490566_g8784_i0 | PRJNA309466 | 8841 | 208 | 2.490566 | 5.18037728 | Duganella levis | 2692169 | Bacteria | Bacteria | 92.4 | 4.7e-22 | NR | WP_161056265.1 | 2692169 | g8784 | i0 | 80.7 | 0.822115384615385 | 57 | 11 | 82.2 | 0 | 1 | 171 | 18 | 74 | WP_161056265.1 ankyrin repeat domain-containing protein [Duganella levis] | diamond | 171 | 92.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Duganella | Duganella levis | ||
| 26852999 | 26852999 | PRJNA309466_P_NODE_18161_length_162_cov_0.920354_g18104_i0 | PRJNA309466 | 18161 | 162 | 0.920354 | 1.49097348 | Methylotenera sp. | 2051956 | Bacteria | Bacteria | 97.1 | 9.07e-22 | NR | WP_300384681.1 | 2051956 | g18104 | i0 | 90.6 | 1.96296296296296 | 53 | 5 | 98.1 | 0 | 2 | 160 | 117 | 169 | WP_300384681.1 M3 family metallopeptidase [Methylotenera sp.] | diamond | 318 | 97.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylotenera | Methylotenera sp. | ||
| 26884568 | 26884568 | PRJNA309466_P_NODE_19561_length_153_cov_3.750000_g19504_i0 | PRJNA309466 | 19561 | 153 | 3.75 | 5.7375 | Agitococcus sp. | 1872415 | Bacteria | Bacteria | 113 | 3.5e-30 | NR | HRH90761.1 | 1872415 | g19504 | i0 | 98 | 1 | 51 | 1 | 100 | 0 | 1 | 153 | 56 | 106 | HRH90761.1 HNH endonuclease signature motif containing protein [Agitococcus sp.] | diamond | 153 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Agitococcus | Agitococcus sp. | ||
| 27042637 | 27042637 | PRJNA309466_P_NODE_12602_length_183_cov_1.544776_g12545_i0 | PRJNA309466 | 12602 | 183 | 1.544776 | 2.82694008 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 113 | 1.23e-28 | NR | MES2502230.1 | 1977087 | g12545 | i0 | 96.6 | 0.967213114754098 | 59 | 2 | 96.7 | 0 | 6 | 182 | 83 | 141 | MES2502230.1 LysR family transcriptional regulator [Pseudomonadota bacterium] | diamond | 177 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 27105677 | 27105677 | PRJNA309466_P_NODE_17202_length_164_cov_1.730435_g17145_i0 | PRJNA309466 | 17202 | 164 | 1.730435 | 2.8379134 | Pseudomonas sp. | 306 | Bacteria | Bacteria | 41.6 | 0.0324 | NR | WP_331103013.1 | 306 | g17145 | i0 | 34.7 | 0.896341463414634 | 49 | 28 | 82.3 | 1 | 4 | 138 | 80 | 128 | WP_331103013.1 TlpA disulfide reductase family protein [Pseudomonas sp.] | diamond | 147 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. | ||
| 27137018 | 27137018 | PRJNA309466_P_NODE_13922_length_176_cov_1.755906_g13865_i0 | PRJNA309466 | 13922 | 176 | 1.755906 | 3.09039456 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 39.7 | 0.0383 | NR | WP_416493070.1 | 573 | g13865 | i0 | 45.2 | 0.715909090909091 | 42 | 23 | 71.6 | 0 | 35 | 160 | 30 | 71 | WP_416493070.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 126 | 39.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 27232250 | 27232250 | PRJNA309466_P_NODE_14883_length_171_cov_12.737705_g14826_i0 | PRJNA309466 | 14883 | 171 | 12.737705 | 21.78147555 | Vulcaniibacterium tengchongense | 1273429 | Bacteria | Bacteria | 64.3 | 1.11e-10 | NR | WP_123771457.1 | 1273429 | g14826 | i0 | 56.6 | 5.56140350877193 | 53 | 21 | 93 | 1 | 11 | 169 | 67 | 117 | WP_123771457.1 glycoside hydrolase family 19 protein [Vulcaniibacterium tengchongense] | diamond | 951 | 64.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Vulcaniibacterium | Vulcaniibacterium tengchongense | ||
| 27390475 | 27390475 | PRJNA309466_P_NODE_11523_length_189_cov_1.750000_g11466_i0 | PRJNA309466 | 11523 | 189 | 1.75 | 3.3075 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 43.5 | 0.00986 | NR | MDX1430853.1 | 1913989 | g11466 | i0 | 44 | 0.793650793650794 | 50 | 26 | 79.4 | 1 | 180 | 31 | 197 | 244 | MDX1430853.1 aromatic ring-hydroxylating dioxygenase subunit alpha [Gammaproteobacteria bacterium] | diamond | 150 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 27422111 | 27422111 | PRJNA309466_P_NODE_19443_length_154_cov_2.619048_g19386_i0 | PRJNA309466 | 19443 | 154 | 2.619048 | 4.03333392 | Burkholderiaceae bacterium | 2030806 | Bacteria | Bacteria | 45.4 | 9.33e-4 | NR | HQX61204.1 | 2030806 | g19386 | i0 | 95.2 | 0.818181818181818 | 21 | 1 | 40.9 | 0 | 62 | 124 | 1 | 21 | HQX61204.1 helix-turn-helix domain-containing protein [Burkholderiaceae bacterium] | diamond | 126 | 45.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderiaceae bacterium | |||
| 27534204 | 27534204 | PRJNA309466_P_NODE_14063_length_175_cov_5.134921_g14006_i0 | PRJNA309466 | 14063 | 175 | 5.134921 | 8.98611175 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 77.4 | 8.56e-15 | NR | HMY01043.1 | 1872415 | g14006 | i0 | 66 | 2.72571428571429 | 53 | 18 | 90.9 | 0 | 3 | 161 | 462 | 514 | HMY01043.1 DUF5906 domain-containing protein [Agitococcus sp.] | diamond | 477 | 77.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Agitococcus | Agitococcus sp. | ||
| 27548143 | 27548143 | PRJNA309466_P_NODE_8544_length_211_cov_0.956790_g8487_i0 | PRJNA309466 | 8544 | 211 | 0.95679 | 2.0188269 | Burkholderiaceae bacterium | 2030806 | Bacteria | Bacteria | 46.6 | 0.0011 | NR | HEU5297290.1 | 2030806 | g8487 | i0 | 33.3 | 0.895734597156398 | 63 | 37 | 82.5 | 2 | 181 | 8 | 645 | 707 | HEU5297290.1 DUF2339 domain-containing protein [Burkholderiaceae bacterium] | diamond | 189 | 46.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderiaceae bacterium | |||
| 27737969 | 27737969 | PRJNA309466_P_NODE_19604_length_153_cov_2.586538_g19547_i0 | PRJNA309466 | 19604 | 153 | 2.586538 | 3.95740314 | Roseateles asaccharophilus | 582607 | Bacteria | Bacteria | 103 | 5.32e-26 | NR | TDP09776.1 | 582607 | g19547 | i0 | 98 | 1 | 51 | 1 | 100 | 0 | 1 | 153 | 123 | 173 | TDP09776.1 ribosome maturation factor RimP [Roseateles asaccharophilus] | diamond | 153 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles asaccharophilus | ||
| 27800920 | 27800920 | PRJNA309466_P_NODE_16064_length_167_cov_2.584746_g16007_i0 | PRJNA309466 | 16064 | 167 | 2.584746 | 4.31652582 | Agitococcus sp. | 1872415 | Bacteria | Bacteria | 115 | 5.149999999999999e-31 | NR | HRH90761.1 | 1872415 | g16007 | i0 | 94.3 | 0.952095808383233 | 53 | 3 | 95.2 | 0 | 4 | 162 | 54 | 106 | HRH90761.1 HNH endonuclease signature motif containing protein [Agitococcus sp.] | diamond | 159 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Agitococcus | Agitococcus sp. | ||
| 27927087 | 27927087 | PRJNA309466_P_NODE_13145_length_180_cov_1.656489_g13088_i0 | PRJNA309466 | 13145 | 180 | 1.656489 | 2.9816802 | Variovorax guangxiensis | 1775474 | Bacteria | Bacteria | 69.7 | 5.88e-14 | NR | WP_184640638.1 | 1775474 | g13088 | i0 | 81.4 | 0.716666666666667 | 43 | 8 | 71.7 | 0 | 160 | 32 | 1 | 43 | WP_184640638.1 hypothetical protein [Variovorax guangxiensis] | diamond | 129 | 69.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax guangxiensis | ||
| 27990337 | 27990337 | PRJNA309466_P_NODE_10325_length_197_cov_1.763514_g10268_i0 | PRJNA309466 | 10325 | 197 | 1.763514 | 3.47412258 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 41.6 | 0.0341 | NR | NCA15162.1 | 1977087 | g10268 | i0 | 34.7 | 0.746192893401015 | 49 | 27 | 70.1 | 2 | 138 | 1 | 81 | 127 | NCA15162.1 hypothetical protein [Pseudomonadota bacterium] | diamond | 147 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 28116437 | 28116437 | PRJNA309466_P_NODE_11205_length_191_cov_2.077465_g11148_i0 | PRJNA309466 | 11205 | 191 | 2.077465 | 3.96795815 | Pseudomonas sp. 8AS | 2653163 | Bacteria | Bacteria | 120 | 1.3099999999999998e-31 | NR | WP_160080297.1 | 2653163 | g11148 | i0 | 88.3 | 1.8848167539267 | 60 | 7 | 94.2 | 0 | 10 | 189 | 120 | 179 | WP_160080297.1 hypothetical protein [Pseudomonas sp. 8AS] | diamond | 360 | 120 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. 8AS | ||
| 28134237 | 28134237 | PRJNA309466_P_NODE_18925_length_157_cov_5.027778_g18868_i0 | PRJNA309466 | 18925 | 157 | 5.027778 | 7.89361146 | root | 1 | Root_unresolved | Root_unresolved | 53.1 | 1.16e-6 | NR | XMY96542.1 | 727 | g18868 | i0 | 65.7 | 4.71974522292994 | 35 | 12 | 66.9 | 0 | 154 | 50 | 1 | 35 | XMY96542.1 sel1 repeat family protein [Haemophilus influenzae] | diamond | 741 | 53.5 | 0.992523364485981 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus influenzae | ||
| 28337573 | 28337573 | PRJNA309466_P_NODE_16106_length_167_cov_1.762712_g16049_i0 | PRJNA309466 | 16106 | 167 | 1.762712 | 2.94372904 | Candidatus Riesia sp. | 2725488 | Bacteria | Bacteria | 56.2 | 2.31e-7 | NR | MCB1711532.1 | 2725488 | g16049 | i0 | 48.1 | 0.970059880239521 | 54 | 28 | 97 | 0 | 6 | 167 | 548 | 601 | MCB1711532.1 class I SAM-dependent methyltransferase [Candidatus Riesia sp.] | diamond | 162 | 56.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Riesia | Candidatus Riesia sp. | ||
| 28418481 | 28418481 | PRJNA309466_P_NODE_16146_length_167_cov_1.542373_g16089_i0 | PRJNA309466 | 16146 | 167 | 1.542373 | 2.57576291 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 112 | 3.8999999999999997e-31 | NR | WP_323825266.1 | 287 | g16089 | i0 | 96.4 | 1.97604790419162 | 55 | 2 | 98.8 | 0 | 165 | 1 | 16 | 70 | WP_323825266.1 hypothetical protein, partial [Pseudomonas aeruginosa] | diamond | 330 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 28779438 | 28779438 | PRJNA309466_P_NODE_16627_length_166_cov_0.888889_g16570_i0 | PRJNA309466 | 16627 | 166 | 0.888889 | 1.47555574 | Burkholderia gladioli | 28095 | Bacteria | Bacteria | 68.6 | 9.79e-14 | NR | WP_186198199.1 | 28095 | g16570 | i0 | 81.8 | 0.795180722891566 | 44 | 8 | 79.5 | 0 | 2 | 133 | 8 | 51 | WP_186198199.1 hypothetical protein [Burkholderia gladioli] | diamond | 132 | 68.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia gladioli | ||
| 28874226 | 28874226 | PRJNA309466_P_NODE_4148_length_284_cov_1.289362_g4092_i0 | PRJNA309466 | 4148 | 284 | 1.289362 | 3.66178808 | Rhodospirillaceae bacterium | 1898112 | Bacteria | Bacteria | 81.6 | 1.25e-15 | NR | MBL0338228.1 | 1898112 | g4092 | i0 | 40 | 1.80633802816901 | 90 | 54 | 95.1 | 0 | 3 | 272 | 115 | 204 | MBL0338228.1 head-tail connector protein [Rhodospirillaceae bacterium] | diamond | 513 | 81.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Rhodospirillaceae | Rhodospirillaceae bacterium | |||
| 28937546 | 28937546 | PRJNA309466_P_NODE_17848_length_163_cov_0.868421_g17791_i0 | PRJNA309466 | 17848 | 163 | 0.868421 | 1.41552623 | Herbaspirillum sp. HC18 | 2488562 | Bacteria | Bacteria | 98.2 | 1.1e-23 | NR | RZI43375.1 | 2488562 | g17791 | i0 | 86.8 | 5.85276073619632 | 53 | 7 | 97.5 | 0 | 4 | 162 | 54 | 106 | RZI43375.1 ABC transporter ATP-binding protein [Herbaspirillum sp. HC18] | diamond | 954 | 98.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum sp. HC18 | ||
| 29000954 | 29000954 | PRJNA309466_P_NODE_4508_length_271_cov_2.279279_g4452_i0 | PRJNA309466 | 4508 | 271 | 2.279279 | 6.17684609 | Acinetobacter sp. | 472 | Bacteria | Bacteria | 130 | 7.199999999999998e-35 | NR | WP_291392118.1 | 472 | g4452 | i0 | 60.9 | 0.96309963099631 | 87 | 34 | 96.3 | 0 | 11 | 271 | 59 | 145 | WP_291392118.1 hypothetical protein [Acinetobacter sp.] | diamond | 261 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. | ||
| 29379473 | 29379473 | PRJNA309466_P_NODE_13589_length_178_cov_1.395349_g13532_i0 | PRJNA309466 | 13589 | 178 | 1.395349 | 2.48372122 | Halothiobacillaceae bacterium | 2268194 | Bacteria | Bacteria | 49.7 | 4.77e-5 | NR | TPW09216.1 | 2268194 | g13532 | i0 | 59.6 | 0.792134831460674 | 47 | 19 | 79.2 | 0 | 162 | 22 | 200 | 246 | TPW09216.1 MAG: putative hemagglutinin-related autotransporter protein, partial [Halothiobacillaceae bacterium] | diamond | 141 | 49.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Halothiobacillaceae | Halothiobacillaceae bacterium | |||
| 29379474 | 29379474 | PRJNA309466_P_NODE_15889_length_168_cov_0.873950_g15832_i0 | PRJNA309466 | 15889 | 168 | 0.87395 | 1.468236 | Novosphingobium lindaniclasticum | 1329895 | Bacteria | Bacteria | 89.4 | 5.05e-19 | NR | WP_031342822.1 | 1329895 | g15832 | i0 | 74.5 | 0.982142857142857 | 55 | 14 | 98.2 | 0 | 166 | 2 | 488 | 542 | WP_031342822.1 phospholipase D-like domain-containing anti-phage protein [Novosphingobium lindaniclasticum] | diamond | 165 | 89.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Novosphingobium | Novosphingobium lindaniclasticum | ||
| 29410953 | 29410953 | PRJNA309466_P_NODE_13269_length_179_cov_6.492308_g13212_i0 | PRJNA309466 | 13269 | 179 | 6.492308 | 11.62123132 | Roseateles asaccharophilus | 582607 | Bacteria | Bacteria | 57.8 | 1.4e-8 | NR | TDP06591.1 | 582607 | g13212 | i0 | 78.8 | 0.553072625698324 | 33 | 7 | 55.3 | 0 | 116 | 18 | 1 | 33 | TDP06591.1 LSU ribosomal protein L19P [Roseateles asaccharophilus] | diamond | 99 | 57.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles asaccharophilus | ||
| 29442387 | 29442387 | PRJNA309466_P_NODE_18130_length_162_cov_0.920354_g18073_i0 | PRJNA309466 | 18130 | 162 | 0.920354 | 1.49097348 | Janthinobacterium tructae | 2590869 | Bacteria | Bacteria | 41.6 | 0.0303 | NR | WP_141172305.1 | 2590869 | g18073 | i0 | 32.1 | 0.981481481481482 | 53 | 36 | 98.1 | 0 | 160 | 2 | 128 | 180 | WP_141172305.1 hypothetical protein [Janthinobacterium tructae] | diamond | 159 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium tructae | ||
| 29491732 | 29491732 | PRJNA309466_P_NODE_15570_length_169_cov_0.866667_g15513_i0 | PRJNA309466 | 15570 | 169 | 0.866667 | 1.46466723 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 111 | 1.1000000000000002e-28 | NR | WP_297922119.1 | 1506599 | g15513 | i0 | 100 | 1.95266272189349 | 55 | 0 | 97.6 | 0 | 3 | 167 | 152 | 206 | WP_297922119.1 hypothetical protein, partial [uncultured Agitococcus sp.] | diamond | 330 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Agitococcus | uncultured Agitococcus sp. | ||
| 29537311 | 29537311 | PRJNA309466_P_NODE_17490_length_163_cov_3.526316_g17433_i0 | PRJNA309466 | 17490 | 163 | 3.526316 | 5.74789508 | Curvibacter sp. | 1888168 | Bacteria | Bacteria | 87.8 | 1.31e-18 | NR | TAH13702.1 | 1888168 | g17433 | i0 | 88.5 | 0.957055214723926 | 52 | 6 | 95.7 | 0 | 159 | 4 | 21 | 72 | TAH13702.1 MAG: molecular chaperone SurA [Curvibacter sp.] | diamond | 156 | 87.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Curvibacter | Curvibacter sp. | ||
| 29568873 | 29568873 | PRJNA309466_P_NODE_14510_length_173_cov_2.451613_g14453_i0 | PRJNA309466 | 14510 | 173 | 2.451613 | 4.24129049 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 73.6 | 1.96e-13 | NR | MAC71651.1 | 1913989 | g14453 | i0 | 56.4 | 0.953757225433526 | 55 | 24 | 95.4 | 0 | 7 | 171 | 131 | 185 | MAC71651.1 hypothetical protein [Gammaproteobacteria bacterium] | diamond | 165 | 73.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 30105721 | 30105721 | PRJNA309466_P_NODE_19812_length_152_cov_2.019417_g19755_i0 | PRJNA309466 | 19812 | 152 | 2.019417 | 3.06951384 | Escherichia coli | 562 | Bacteria | Bacteria | 73.2 | 1.11e-15 | NR | WP_214019098.1 | 562 | g19755 | i0 | 96 | 0.986842105263158 | 50 | 2 | 98.7 | 0 | 152 | 3 | 6 | 55 | WP_214019098.1 hypothetical protein, partial [Escherichia coli] | diamond | 150 | 73.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 30295834 | 30295834 | PRJNA309466_P_NODE_17492_length_163_cov_3.482456_g17435_i0 | PRJNA309466 | 17492 | 163 | 3.482456 | 5.67640328 | Roseateles sp. DAIF2 | 2714952 | Bacteria | Bacteria | 80.5 | 6.27e-16 | NR | WP_249937099.1 | 2714952 | g17435 | i0 | 86.3 | 0.938650306748466 | 51 | 7 | 93.9 | 0 | 2 | 154 | 109 | 159 | WP_249937099.1 tetratricopeptide repeat protein [Roseateles sp. DAIF2] | diamond | 153 | 80.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. DAIF2 | ||
| 30990655 | 30990655 | PRJNA309466_P_NODE_11654_length_188_cov_2.913669_g11597_i0 | PRJNA309466 | 11654 | 188 | 2.913669 | 5.47769772 | Betaproteobacteria bacterium | 1891241 | Bacteria | Bacteria | 75.9 | 9.26e-15 | NR | MFN8962401.1 | 1891241 | g11597 | i0 | 55.7 | 0.973404255319149 | 61 | 27 | 97.3 | 0 | 184 | 2 | 81 | 141 | MFN8962401.1 YqaJ viral recombinase family protein [Betaproteobacteria bacterium] | diamond | 183 | 75.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Betaproteobacteria bacterium | |||||
| 31022151 | 31022151 | PRJNA309466_P_NODE_11615_length_188_cov_50.863309_g11558_i0 | PRJNA309466 | 11615 | 188 | 50.863309 | 95.62302092 | Gallionella sp. | 2052161 | Bacteria | Bacteria | 42.7 | 0.015 | NR | MCG6932102.1 | 2052161 | g11558 | i0 | 39.2 | 1.62765957446809 | 51 | 31 | 81.4 | 0 | 32 | 184 | 43 | 93 | MCG6932102.1 LexA family transcriptional regulator [Gallionella sp.] | diamond | 306 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Gallionellaceae | Gallionella | Gallionella sp. | ||
| 31591425 | 31591425 | PRJNA309466_P_NODE_7956_length_216_cov_1.868263_g7899_i0 | PRJNA309466 | 7956 | 216 | 1.868263 | 4.03544808 | Burkholderia gladioli | 28095 | Bacteria | Bacteria | 140 | 5.71e-40 | NR | WP_244141526.1 | 28095 | g7899 | i0 | 93.1 | 1 | 72 | 5 | 100 | 0 | 216 | 1 | 116 | 187 | WP_244141526.1 DUF4145 domain-containing protein [Burkholderia gladioli] | diamond | 216 | 140 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia gladioli | ||
| 31749251 | 31749251 | PRJNA309466_P_NODE_11037_length_192_cov_3.244755_g10980_i0 | PRJNA309466 | 11037 | 192 | 3.244755 | 6.2299296 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 52.8 | 5.77e-7 | NR | MBU1235031.1 | 1977087 | g10980 | i0 | 56.1 | 1.734375 | 41 | 18 | 64.1 | 0 | 8 | 130 | 9 | 49 | MBU1235031.1 hypothetical protein [Pseudomonadota bacterium] | diamond | 333 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 32097354 | 32097354 | PRJNA309466_P_NODE_19578_length_153_cov_2.961538_g19521_i0 | PRJNA309466 | 19578 | 153 | 2.961538 | 4.53115314 | Polaromonas sp. | 1869339 | Bacteria | Bacteria | 84.7 | 1.64e-17 | NR | MDO9402049.1 | 1869339 | g19521 | i0 | 65.3 | 0.96078431372549 | 49 | 17 | 96.1 | 0 | 5 | 151 | 282 | 330 | MDO9402049.1 phage terminase large subunit [Polaromonas sp.] | diamond | 147 | 84.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Polaromonas | Polaromonas sp. | ||
| 32160878 | 32160878 | PRJNA309466_P_NODE_15638_length_169_cov_0.866667_g15581_i0 | PRJNA309466 | 15638 | 169 | 0.866667 | 1.46466723 | Hyphomicrobiaceae bacterium | 2015799 | Bacteria | Bacteria | 78.2 | 4.28e-15 | NR | TXH09319.1 | 2015799 | g15581 | i0 | 63 | 1.91715976331361 | 54 | 20 | 95.9 | 0 | 163 | 2 | 103 | 156 | TXH09319.1 MAG: terminase [Hyphomicrobiaceae bacterium] | diamond | 324 | 78.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiaceae | Hyphomicrobiaceae bacterium | |||
| 32192393 | 32192393 | PRJNA309466_P_NODE_12418_length_184_cov_1.533333_g12361_i0 | PRJNA309466 | 12418 | 184 | 1.533333 | 2.82133272 | Zoogloea sp. | 49181 | Bacteria | Bacteria | 39.7 | 0.0494 | NR | WP_299865616.1 | 49181 | g12361 | i0 | 45.5 | 0.53804347826087 | 33 | 18 | 53.8 | 0 | 183 | 85 | 34 | 66 | WP_299865616.1 hypothetical protein [Zoogloea sp.] | diamond | 99 | 39.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Zoogloeaceae | Zoogloea | Zoogloea sp. | ||
| 32445671 | 32445671 | PRJNA309466_P_NODE_14319_length_174_cov_2.496000_g14262_i0 | PRJNA309466 | 14319 | 174 | 2.496 | 4.34304 | unclassified Pseudomonas | 196821 | Bacteria | Bacteria | 85.9 | 9.46e-18 | NR | WP_236468733.1 | 196821 | g14262 | i0 | 100 | 1.48275862068966 | 43 | 0 | 74.1 | 0 | 1 | 129 | 597 | 639 | WP_236468733.1 MULTISPECIES: hypothetical protein [unclassified Pseudomonas] | diamond | 258 | 85.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | |||
| 32509007 | 32509007 | PRJNA309466_P_NODE_17099_length_164_cov_3.513043_g17042_i0 | PRJNA309466 | 17099 | 164 | 3.513043 | 5.76139052 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 68.2 | 1.17e-11 | NR | NBP02342.1 | 1977087 | g17042 | i0 | 66 | 0.969512195121951 | 53 | 16 | 97 | 1 | 6 | 164 | 209 | 259 | NBP02342.1 recombinase RecA [Pseudomonadota bacterium] | diamond | 159 | 68.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 32792170 | 32792170 | PRJNA309466_P_NODE_16260_length_167_cov_0.881356_g16203_i0 | PRJNA309466 | 16260 | 167 | 0.881356 | 1.47186452 | Roseateles aquatilis | 431061 | Bacteria | Bacteria | 108 | 1.34e-26 | NR | WP_088382706.1 | 431061 | g16203 | i0 | 98.2 | 0.988023952095808 | 55 | 1 | 98.8 | 0 | 2 | 166 | 104 | 158 | WP_088382706.1 EscU/YscU/HrcU family type III secretion system export apparatus switch protein [Roseateles aquatilis] | diamond | 165 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles aquatilis | ||
| 32823911 | 32823911 | PRJNA309466_P_NODE_10900_length_193_cov_3.444444_g10843_i0 | PRJNA309466 | 10900 | 193 | 3.444444 | 6.64777692 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 40.8 | 0.0169 | NR | WP_416493070.1 | 573 | g10843 | i0 | 49.2 | 1.01036269430052 | 65 | 27 | 96.4 | 2 | 187 | 2 | 13 | 74 | WP_416493070.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 195 | 40.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 32855280 | 32855280 | PRJNA309466_P_NODE_10920_length_193_cov_2.083333_g10863_i0 | PRJNA309466 | 10920 | 193 | 2.083333 | 4.02083269 | Duganella callida | 2561932 | Bacteria | Bacteria | 48.5 | 1.79e-4 | NR | WP_135203306.1 | 2561932 | g10863 | i0 | 51.3 | 0.606217616580311 | 39 | 19 | 60.6 | 0 | 178 | 62 | 938 | 976 | WP_135203306.1 tetratricopeptide repeat protein [Duganella callida] | diamond | 117 | 48.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Duganella | Duganella callida |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;