RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA309466" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA309466 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26757597 26757597 PRJNA309466_P_NODE_14941_length_171_cov_2.360656_g14884_i0 PRJNA309466 14941 171 2.360656 4.03672176 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 86.3 2.08e-18   NR MFM9963103.1 2026779 g14884 i0 73.9 4.03508771929825 46 12 80.7 0 140 3 2 47 MFM9963103.1 phage Gp37/Gp68 family protein [Planctomycetaceae bacterium] diamond 690 86.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
27692338 27692338 PRJNA309466_P_NODE_19804_length_152_cov_2.019417_g19747_i0 PRJNA309466 19804 152 2.019417 3.06951384 Pseudomonadati 3379134 Bacteria Bacteria 73.2 2.81e-15   NR MFH1226526.1 2026780 g19747 i0 70.2 3.71052631578947 47 14 92.8 0 12 152 17 63 MFH1226526.1 nucleotide pyrophosphohydrolase [Planctomycetota bacterium] diamond 564 73.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31654312 31654312 PRJNA309466_P_NODE_17617_length_163_cov_1.394737_g17560_i0 PRJNA309466 17617 163 1.394737 2.27342131 Phycisphaerales bacterium 2052180 Bacteria Bacteria 82.4 2.87e-18   NR MDI9320589.1 2052180 g17560 i0 76.9 0.957055214723926 52 12 95.7 0 5 160 81 132 MDI9320589.1 hypothetical protein [Phycisphaerales bacterium] diamond 156 82.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;