RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA309466" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA309466 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30769424 30769424 PRJNA309466_P_NODE_14974_length_171_cov_1.704918_g14917_i0 PRJNA309466 14974 171 1.704918 2.91540978 Crogonang virus 159 3062886 Viruses Viruses 90.9 1.52e-19   NR WPR17963.1 3062886 g14917 i0 87 0.807017543859649 46 6 80.7 0 140 3 1180 1225 WPR17963.1 MAG: capsid protein [Crogonang virus 159] diamond 138 90.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 159
31844156 31844156 PRJNA309466_P_NODE_9637_length_202_cov_1.352941_g9580_i0 PRJNA309466 9637 202 1.352941 2.73294082 Crogonang virus 159 3062886 Viruses Viruses 140 8.769999999999999e-37   NR WPR17963.1 3062886 g9580 i0 97 0.98019801980198 66 2 98 0 200 3 1240 1305 WPR17963.1 MAG: capsid protein [Crogonang virus 159] diamond 198 140 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 159
32382223 32382223 PRJNA309466_P_NODE_15339_length_169_cov_8.075000_g15282_i0 PRJNA309466 15339 169 8.075 13.64675 Crogonang virus 159 3062886 Viruses Viruses 48.1 1.74e-4   NR XII42848.1 3062886 g15282 i0 71.9 1.13609467455621 32 9 56.8 0 7 102 92 123 XII42848.1 MAG: capsid protein, partial [Crogonang virus 159] diamond 192 48.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 159

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;