contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA309466" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27074218 | 27074218 | PRJNA309466_P_NODE_5182_length_254_cov_4.809756_g5125_i0 | PRJNA309466 | 5182 | 254 | 4.809756 | 12.21678024 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 42.7 | 0.0419 | NR | MBQ7035414.1 | 2044939 | g5125 | i0 | 37.5 | 0.566929133858268 | 48 | 26 | 52 | 1 | 72 | 203 | 432 | 479 | MBQ7035414.1 oligosaccharide flippase family protein [Clostridia bacterium] | diamond | 144 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 27863821 | 27863821 | PRJNA309466_P_NODE_12805_length_182_cov_1.518797_g12748_i0 | PRJNA309466 | 12805 | 182 | 1.518797 | 2.76421054 | Clostridiales bacterium | 1898207 | Bacteria | Bacteria | 43.1 | 0.0116 | NR | MCC8022615.1 | 1898207 | g12748 | i0 | 40.7 | 0.89010989010989 | 54 | 32 | 89 | 0 | 21 | 182 | 30 | 83 | MCC8022615.1 hypothetical protein [Clostridiales bacterium] | diamond | 162 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 28197105 | 28197105 | PRJNA309466_P_NODE_16206_length_167_cov_1.059322_g16149_i0 | PRJNA309466 | 16206 | 167 | 1.059322 | 1.7690677400000001 | Streptococcus | 1301 | Bacteria | Bacteria | 91.3 | 1.06e-19 | NR | WP_216629097.1 | 2589786 | g16149 | i0 | 98.2 | 1.97604790419162 | 55 | 1 | 98.8 | 0 | 166 | 2 | 1275 | 1329 | WP_216629097.1 DUF1542 domain-containing protein, partial [Streptococcus shenyangsis] | diamond | 330 | 91.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus shenyangsis | ||
| 28369038 | 28369038 | PRJNA309466_P_NODE_13506_length_178_cov_2.286822_g13449_i0 | PRJNA309466 | 13506 | 178 | 2.286822 | 4.07054316 | Bulleidia sp. 1 | 2704657 | Bacteria | Bacteria | 38.9 | 0.0495 | NR | BFR83729.1 | 3241172 | g13449 | i0 | 45.7 | 0.589887640449438 | 35 | 18 | 59 | 1 | 41 | 145 | 15 | 48 | BFR83729.1 hypothetical protein AB8736_04110 [Bulleidia sp. 10714-15] | diamond | 105 | 38.9 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Bulleidia | Bulleidia sp. 10714-15 | ||
| 28937547 | 28937547 | PRJNA309466_P_NODE_7188_length_224_cov_1.051429_g7131_i0 | PRJNA309466 | 7188 | 224 | 1.051429 | 2.35520096 | Acetoanaerobium sp. | 1872093 | Bacteria | Bacteria | 110 | 1.3e-29 | NR | MBP8762288.1 | 1872093 | g7131 | i0 | 75.8 | 0.883928571428571 | 66 | 16 | 88.4 | 0 | 2 | 199 | 29 | 94 | MBP8762288.1 hypothetical protein [Acetoanaerobium sp.] | diamond | 198 | 110 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Filifactoraceae | Acetoanaerobium | Acetoanaerobium sp. | ||
| 29631777 | 29631777 | PRJNA309466_P_NODE_10270_length_197_cov_886.790541_g10213_i0 | PRJNA309466 | 10270 | 197 | 886.790541 | 1746.97736577 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 49.3 | 8.55e-6 | NR | MBO8584329.1 | 1280 | g10213 | i0 | 100 | 1.09644670050761 | 24 | 0 | 36.5 | 0 | 137 | 66 | 21 | 44 | MBO8584329.1 histone protein [Staphylococcus aureus] | diamond | 216 | 49.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 30453635 | 30453635 | PRJNA309466_P_NODE_14753_length_172_cov_1.853659_g14696_i0 | PRJNA309466 | 14753 | 172 | 1.853659 | 3.18829348 | Ureibacillus xyleni | 614648 | Bacteria | Bacteria | 41.2 | 0.00551 | NR | WP_161946748.1 | 614648 | g14696 | i0 | 42.5 | 0.697674418604651 | 40 | 23 | 69.8 | 0 | 152 | 33 | 2 | 41 | WP_161946748.1 hypothetical protein [Ureibacillus xyleni] | diamond | 120 | 41.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Ureibacillus | Ureibacillus xyleni | ||
| 30628717 | 30628717 | PRJNA309466_P_NODE_16253_length_167_cov_0.881356_g16196_i0 | PRJNA309466 | 16253 | 167 | 0.881356 | 1.47186452 | Bacillota | 1239 | Bacteria | Bacteria | 72.8 | 3.35e-13 | NR | MBR3199418.1 | 1903720 | g16196 | i0 | 59.3 | 12.4670658682635 | 54 | 21 | 97 | 1 | 165 | 4 | 18 | 70 | MBR3199418.1 hypothetical protein [Bacilli bacterium] | diamond | 2082 | 73.2 | 0.994535519125683 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 31939064 | 31939064 | PRJNA309466_P_NODE_7557_length_220_cov_1.216374_g7500_i0 | PRJNA309466 | 7557 | 220 | 1.216374 | 2.6760228 | Bacillus paralicheniformis | 1648923 | Bacteria | Bacteria | 43.1 | 0.0107 | NR | WP_216393782.1 | 1648923 | g7500 | i0 | 40 | 1.05 | 40 | 24 | 54.5 | 0 | 160 | 41 | 4 | 43 | WP_216393782.1 HNH endonuclease [Bacillus paralicheniformis] | diamond | 231 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus paralicheniformis | ||
| 32160876 | 32160876 | PRJNA309466_P_NODE_12098_length_186_cov_0.978102_g12041_i0 | PRJNA309466 | 12098 | 186 | 0.978102 | 1.81926972 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 47.4 | 6.21e-5 | NR | WP_145357379.1 | 1282 | g12041 | i0 | 100 | 0.403225806451613 | 25 | 0 | 40.3 | 0 | 182 | 108 | 1 | 25 | WP_145357379.1 LPXTG cell wall anchor domain-containing protein, partial [Staphylococcus epidermidis] | diamond | 75 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 32178467 | 32178467 | PRJNA309466_P_NODE_16258_length_167_cov_0.881356_g16201_i0 | PRJNA309466 | 16258 | 167 | 0.881356 | 1.47186452 | Bacteria | 2 | Bacteria | Bacteria | 41.6 | 0.00493 | NR | MFK5284370.1 | 1597 | g16201 | i0 | 53.7 | 1.47305389221557 | 41 | 18 | 73.7 | 1 | 39 | 161 | 1 | 40 | MFK5284370.1 recombination protein NinB [Lacticaseibacillus paracasei] | diamond | 246 | 41.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Lacticaseibacillus paracasei |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;