RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA309466" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA309466 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27105676 27105676 PRJNA309466_P_NODE_16942_length_165_cov_0.896552_g16885_i0 PRJNA309466 16942 165 0.896552 1.4793108 Indivirus ILV1 1977633 Viruses Viruses 89 2.66e-19   NR ARF10107.1 1977633 g16885 i0 79.2 0.963636363636364 53 11 96.4 0 160 2 261 313 ARF10107.1 transposase [Indivirus ILV1] diamond 159 89 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
32509006 32509006 PRJNA309466_P_NODE_11659_length_188_cov_2.741007_g11602_i0 PRJNA309466 11659 188 2.741007 5.15309316 Nucleocytoviricota sp. 2809609 Viruses Viruses 75.9 3.72e-14   NR UZT28811.1 2809609 g11602 i0 57.4 0.973404255319149 61 25 95.7 1 4 183 359 419 UZT28811.1 phosphotransferase [Nucleocytoviricota sp.] diamond 183 75.9 1 Viruses   Bamfordvirae Nucleocytoviricota         Nucleocytoviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;