RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA306153" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA306153 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4203539 4203539 PRJNA306153_S_NODE_844_length_260_cov_4.554113_g831_i0 PRJNA306153 844 260 4.554113 11.8406938 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 121 1.44e-31   NR MES1907458.1 1215613 g831 i0 70.2 1.95 84 25 96.9 0 4 255 76 159 MES1907458.1 hypothetical protein [Cercozoa sp. M6MM] diamond 507 121 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
5479839 5479839 PRJNA306153_S_NODE_1945_length_178_cov_2.342282_g1932_i0 PRJNA306153 1945 178 2.342282 4.16926196 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 101 1.54e-25   NR AAT09077.1 227086 g1932 i0 84.2 1.93820224719101 57 9 96.1 0 178 8 59 115 AAT09077.1 transcription factor BTF3 [Bigelowiella natans] diamond 345 101 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;