RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA299585" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 2 ✖

bioproject 1

  • PRJNA299585 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26680185 26680185 PRJNA299585_S_NODE_9781_length_215_cov_3.860215_g9551_i0 PRJNA299585 9781 215 3.860215 8.29946225 Viruses 10239 Viruses Viruses 67 7.04e-11   NR ATS94414.1 2052569 g9551 i0 54.4 1.70232558139535 57 26 79.5 0 38 208 280 336 ATS94414.1 coat protein [Podosphaera prunicola partitivirus 3] diamond 366 67.4 0.99406528189911 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Podosphaera prunicola partitivirus 3
29410926 29410926 PRJNA299585_S_NODE_3229_length_504_cov_11.993684_g3013_i0 PRJNA299585 3229 504 11.993684 60.44816736 Pimephales minnow adintovirus 2609864 Viruses Viruses 67.8 4.64e-10   NR DAC81404.1 2609864 g3013 i0 29.4 1.82142857142857 126 88 74.4 1 123 497 17 142 DAC81404.1 TPA_asm: hypothetical protein [Pimephales minnow adintovirus] diamond 918 67.8 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;