RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA293022 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22049762 22049762 PRJNA293022_P_NODE_46358_length_205_cov_1.307692_g45621_i0 PRJNA293022 46358 205 1.307692 2.6807686 Dreissena polymorpha 45954 Mollusca Mollusca 113 3.64e-29   NR XP_052279311.1 45954 g45621 i0 89.1 4.68292682926829 64 7 93.7 0 4 195 120 183 XP_052279311.1 40S ribosomal protein S6-like [Dreissena polymorpha] diamond 960 113 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
27136972 27136972 PRJNA293022_P_NODE_75702_length_164_cov_0.904348_g74965_i0 PRJNA293022 75702 164 0.904348 1.48313072 Liolophura japonica 13599 Mollusca Mollusca 43.9 0.00505   NR XP_064612331.1 13599 g74965 i0 59.5 0.676829268292683 37 15 67.7 0 112 2 288 324 XP_064612331.1 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit C-like [Liolophura japonica] diamond 111 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
27358841 27358841 PRJNA293022_P_NODE_37923_length_227_cov_1.117978_g37186_i0 PRJNA293022 37923 227 1.117978 2.53781006 Saccostrea cuccullata 36930 Mollusca Mollusca 47.4 6.71e-4   NR XP_062599881.1 36930 g37186 i0 32.2 1.70484581497797 59 40 78 0 24 200 21 79 XP_062599881.1 uncharacterized protein LOC134261454 [Saccostrea cuccullata] diamond 387 47.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
28368978 28368978 PRJNA293022_P_NODE_59306_length_180_cov_3.129771_g58569_i0 PRJNA293022 59306 180 3.129771 5.6335878 Acanthosepion pharaonis 158019 Mollusca Mollusca 41.2 0.0496   NR CAE1281722.1 158019 g58569 i0 51 0.85 51 16 75 3 44 178 4 51 CAE1281722.1 unnamed protein product [Acanthosepion pharaonis] diamond 153 41.2 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
31102715 31102715 PRJNA293022_P_NODE_81415_length_157_cov_2.833333_g80678_i0 PRJNA293022 81415 157 2.833333 4.44833281 Metazoa 33208 Mollusca Mollusca 44.7 0.00246   NR XP_052103364.1 6549 g80678 i0 81 34.9108280254777 21 4 40.1 0 50 112 652 672 XP_052103364.1 uncharacterized protein LOC127736809 [Mytilus californianus] diamond 5481 45.1 0.991130820399113 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
31211171 31211171 PRJNA293022_P_NODE_38155_length_226_cov_1.768362_g37418_i0 PRJNA293022 38155 226 1.768362 3.99649812 Liolophura japonica 13599 Mollusca Mollusca 52.4 1.25e-5   NR XP_064599930.1 13599 g37418 i0 38.2 0.902654867256637 68 42 90.3 0 226 23 288 355 XP_064599930.1 LOW QUALITY PROTEIN: spectrin beta chain-like [Liolophura japonica] diamond 204 52.4 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
31464900 31464900 PRJNA293022_P_NODE_43876_length_210_cov_7.819876_g43139_i0 PRJNA293022 43876 210 7.819876 16.4217396 Acanthosepion pharaonis 158019 Mollusca Mollusca 42.4 0.0335   NR CAE1162969.1 158019 g43139 i0 52.2 0.957142857142857 67 16 92.9 5 2 196 606 658 CAE1162969.1 unnamed protein product [Acanthosepion pharaonis] diamond 201 42.4 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
32002443 32002443 PRJNA293022_P_NODE_30378_length_254_cov_5.790244_g29641_i0 PRJNA293022 30378 254 5.790244 14.70721976 Haliotis asinina 109174 Mollusca Mollusca 43.9 0.0159   NR XP_067657806.1 109174 g29641 i0 35.4 1.51181102362205 65 36 75.6 2 19 210 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;